Pairwise Alignments

Query, 705 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 831 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  278 bits (710), Expect = 1e-78
 Identities = 164/393 (41%), Positives = 234/393 (59%), Gaps = 9/393 (2%)

Query: 318 EAARQAEALMHNSERMEVVGQLAGGMGHEMNNLLSGIGGSLELLQRRLQEGRLERVEAYV 377
           E  R  +AL H +++ME VGQL GG+ H+ NN+L+GI GSL+L+QR +  GR + +  + 
Sbjct: 441 ERERAEDALRH-AQKMEAVGQLTGGIAHDFNNMLTGIIGSLDLMQRYIAAGRSDEIGRFT 499

Query: 378 DVARDSVQRAMDLTHRLIAFSRHQPLAPRPLDFNRQLRLSEPLLLRALGAEMRLHWQLDV 437
           D A  S  RA  LTHRL+AFSR Q L  RPLD N+ +   E L  R  GA + L  +L  
Sbjct: 500 DAAVSSAHRAAALTHRLLAFSRRQSLDRRPLDPNQLVASLEDLFRRTKGAHITLKVKLGH 559

Query: 438 APWAVSLDVPQLENALIHLCANAREACLEQGNVTISSVNERLTAFFPDEGGLPP---GDY 494
             W V+ D  QLENAL++L  NAR+A  + G + I + N  L     D   L P   GDY
Sbjct: 560 DIWPVNTDASQLENALLNLVINARDAMPDGGELLIETANSYLDG--TDITTLEPVKAGDY 617

Query: 495 VALHVEDDGHGMAAADIARAFEPFYTTKPLGRGAGLGLSMVYGFVRQSGGYAWIESTPEQ 554
           V L V D+G GMA   +A+AF+PF+TTKP+G+G GLGLSM+YGF +QSGG+  I+S P Q
Sbjct: 618 VMLGVCDNGTGMAPKILAKAFDPFFTTKPIGQGTGLGLSMIYGFAQQSGGHVTIQSEPGQ 677

Query: 555 GTRVSMLFPRSHEPVPDEPAPVPLSQR--MARGERLLLVDDELDLRAVMREYLTERGFDV 612
           GT V +  PR +    +   P  LS+      GE +++V+D+  +R ++   L E G+  
Sbjct: 678 GTCVRLYLPRLYGTALESSLPPHLSEAPVALAGEAVVVVEDDPAVRMLVVNVLDELGYTA 737

Query: 613 TDVGDANSALERFRHGGPFDLVITDIGLPGGFSGRQVAKAMRMQLAQQKILFITGYADQS 672
               DA +AL         DL++TD+GLP G +GRQ+A+  R      ++LF+TGYA+++
Sbjct: 738 HQAADARTALPLLESDLRVDLLVTDVGLP-GMNGRQLAEIARQYRPGLRVLFMTGYAEKA 796

Query: 673 IEAQLLDQPGTALLNKPFSLAHLADEALRLLDV 705
            E Q   + G  ++ KPFS+  LA +   ++ V
Sbjct: 797 AERQGFLEDGMDMVAKPFSIDLLATKIRSMISV 829



 Score = 90.5 bits (223), Expect = 3e-22
 Identities = 77/289 (26%), Positives = 118/289 (40%), Gaps = 26/289 (8%)

Query: 49  IAQFDWWRTSLGPLSRWPASLRIAVDMMHLSPFPCAVVWGADLCVVHNNGYRAL--RALP 106
           IA+ DW ++ LG  + WP SLR AVD++  SP P  ++WG  L  ++N+G+  L     P
Sbjct: 14  IARLDWAQSPLGEANDWPQSLRTAVDIVVHSPMPMLLLWGDQLTQLYNDGFAQLAGNKHP 73

Query: 107 DALGMAFDTLWSDIWPAVGPWVFKALEGHSNFVEDPPLRIVRSEGAEPLWCAFGYAPLHD 166
            A+G      W ++     P     L G      +    + R+     +W    Y+P+ D
Sbjct: 74  AAMGQPAHQTWPELESFTAPVYDAVLSGQVRTFSEQRFVLQRNNRDMEIWLDLTYSPIRD 133

Query: 167 ELGNVAGFLHTVIETTASVEAHRHWREQVQSFERQVAQHVAEREQFWLLSREAMMMLTPE 226
           E   VAG L T IET    +A  +  +++Q     +A   A     W +  +  +     
Sbjct: 134 ESTRVAGILVTAIETNERRKAQHNTEQRLQ---LALAATDAVGTWDWDIGEDRFIADAHF 190

Query: 227 LKLHGANPAWYRILGWTQEQVQAMSVMELVHPTERTEVRLAVSGLFQCSHAEQLEIRLRH 286
             LHG +P+  R+L            +  VHP +R  V  ++            E RL  
Sbjct: 191 AYLHGVDPSDARLL-------PISDYLHGVHPEDRGMVAGSIKHCITFGTEYAEEYRLLL 243

Query: 287 RDGHYHWF-----------RWSARFDGSLLTAVGRDITADREEAARQAE 324
            DG   W               ARF G+ L    R  T   E+A RQ++
Sbjct: 244 ADGQVRWVFARGRCYKDHQGRPARFLGAALDLTERKHT---EQALRQSQ 289



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 144 LRIVRSEGAEPLWCAFGYAPLHDELGNVAGFLHTVIETT---ASVEAHRHWREQVQSFER 200
           + I       P      Y P     G+V GF   VI+ T    + EA RH  E ++    
Sbjct: 363 MTITPHRDGRPRHALMKYLPRFSNDGSVNGFYIFVIDETERKLTEEALRHLNENLEERVA 422

Query: 201 QVAQHVAEREQ 211
           Q  Q +AE  Q
Sbjct: 423 QRTQALAEANQ 433