Pairwise Alignments

Query, 705 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 844 a.a., no description from Variovorax sp. SCN45

 Score =  374 bits (960), Expect = e-107
 Identities = 219/546 (40%), Positives = 305/546 (55%), Gaps = 5/546 (0%)

Query: 164 LHDELGNVAGFLHTVIETTASVEAHRHWREQVQSFERQVAQHVAEREQFWLLSREAMMML 223
           L DEL  +      V    A  EA    +   +S ERQV     ER++ W LS++ + + 
Sbjct: 297 LADELDFIREVGDRVRSAIARREAQIELKAFAESLERQVEARTYERDRTWALSQDLLGVA 356

Query: 224 TPELKLHGANPAWYRILGWTQEQVQAMSVMELVHPTERTEVRLAVSGLFQCSHAEQLEIR 283
             +      NPAW  +LGW+ ++++A+    LVH  +       +  L         E R
Sbjct: 357 NAQGYFVSVNPAWETVLGWSADEIRALPFRTLVHADDLALTEAELQRLTLGERTTGFENR 416

Query: 284 LRHRDGHYHWFRWSARFDGSLLTAVGRDITADREEAAR--QAEALMHNSERMEVVGQLAG 341
            R + G Y W  W+A  D  LL A  RDIT  +E AA    A   +  S+++E VGQL G
Sbjct: 417 YRMKSGGYRWLSWTAVPDNGLLYAAARDITEQKERAAELDTAREQLRQSQKLEAVGQLTG 476

Query: 342 GMGHEMNNLLSGIGGSLELLQRRLQEGRLERVEAYVDVARDSVQRAMDLTHRLIAFSRHQ 401
           G+ H+ NNLL+ I GSLEL++RR  +G+   +E YV VA+ +V+RA  LTHRL+AFSR Q
Sbjct: 477 GLAHDFNNLLAAISGSLELMRRRGLDGKPADMERYVGVAQGAVKRAASLTHRLLAFSRRQ 536

Query: 402 PLAPRPLDFNRQLRLSEPLLLRALGAEMRLHWQLDVAPWAVSLDVPQLENALIHLCANAR 461
            L P+PL+ NR +   E LL R LG ++ L     V  W V  D  QLENAL++LC NAR
Sbjct: 537 TLEPKPLNANRLVTEMEELLRRTLGPQIALETVAAVGLWNVHADPGQLENALLNLCINAR 596

Query: 462 EACLEQGNVTISSVNERLTAFFPDEGGLPPGDYVALHVEDDGHGMAAADIARAFEPFYTT 521
           +A  E G + I + N  + A       LP G YV+L V D+G GM    +ARAF+PF+TT
Sbjct: 597 DAMPEGGTLVIETANRWIDARTARGRDLPMGQYVSLTVSDNGVGMPPEVVARAFDPFFTT 656

Query: 522 KPLGRGAGLGLSMVYGFVRQSGGYAWIESTPEQGTRVSMLFPR--SHEPVPDEPAPVPLS 579
           KP+G G GLGLSM+YGF +QSGG   I S   +GT VS+  PR    E V   PA   L+
Sbjct: 657 KPIGMGTGLGLSMIYGFAKQSGGQVRIYSEVGKGTSVSIYLPRHDMQEEVAAAPAETMLA 716

Query: 580 QRMARGERLLLVDDELDLRAVMREYLTERGFDVTDVGDANSALERFRHGGP-FDLVITDI 638
            R  +G+ +L+VDDE  LR ++ E +   G+   + GD   AL   +      DL+++D+
Sbjct: 717 PRADQGDTVLVVDDEPALRMIIVEVMQGLGYATLEAGDGAEALRILQSPRQRIDLLVSDV 776

Query: 639 GLPGGFSGRQVAKAMRMQLAQQKILFITGYADQSIEAQLLDQPGTALLNKPFSLAHLADE 698
           GLPGG +GRQVA A R      K+LFITGYA+ ++ +     PG  ++ KPF +  LA  
Sbjct: 777 GLPGGMNGRQVADAARTARPGLKVLFITGYAENAVLSHGHLDPGMHVMTKPFEMDVLARR 836

Query: 699 ALRLLD 704
             +L++
Sbjct: 837 VKQLIE 842



 Score = 35.4 bits (80), Expect = 1e-05
 Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 1/101 (0%)

Query: 588 LLLVDDELDLRAVMREYLTERGFDVTDVGDANSALERFRHGGPFDLVITDIGLPGGFSGR 647
           L+L D   D+  ++           T V           +GG F L+++D  LP GFSG 
Sbjct: 18  LILEDSRFDVELLLEALSRALPAATTHVVRDERGFVEALNGGGFSLILSDYELP-GFSGA 76

Query: 648 QVAKAMRMQLAQQKILFITGYADQSIEAQLLDQPGTALLNK 688
              +  R    +   +F++G   +    +LL    T  ++K
Sbjct: 77  HALEVARRLAPETPFVFVSGVIGEDNAVELLKSGATDYVSK 117