Pairwise Alignments

Query, 705 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 794 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  270 bits (690), Expect = 2e-76
 Identities = 153/353 (43%), Positives = 209/353 (59%), Gaps = 5/353 (1%)

Query: 315 DREEAARQAEALMHNSERMEVVGQLAGGMGHEMNNLLSGIGGSLELLQRRLQEGRLERVE 374
           +R     +AEA +  S++ME VGQL GG+ H+ NNLL  I GSLELL+R+L++     + 
Sbjct: 436 ERTAELMKAEATLRQSQKMEAVGQLTGGLAHDFNNLLGAISGSLELLKRKLEDN--PGLS 493

Query: 375 AYVDVARDSVQRAMDLTHRLIAFSRHQPLAPRPLDFNRQLRLSEPLLLRALGAEMRLHWQ 434
            YVD+ + + +RA  LTHRL+AFSR Q L P+ +  N+ +   E L+ RA+G ++ L   
Sbjct: 494 RYVDIGQTATKRAAALTHRLLAFSRQQTLEPKVVKVNQLVGGFEELVRRAIGPQVALEVV 553

Query: 435 LDVAPWAVSLDVPQLENALIHLCANAREACLEQGNVTISSVNERLTAFFPDEGGLPPGDY 494
             +  W V +D  QLENAL++LC NAR+A    G + I + N  L      E  + PG Y
Sbjct: 554 AGIGIWPVHVDPGQLENALLNLCINARDAMPGGGRLVIETANRSLDELAASEHQMLPGQY 613

Query: 495 VALHVEDDGHGMAAADIARAFEPFYTTKPLGRGAGLGLSMVYGFVRQSGGYAWIESTPEQ 554
           V++ V D+G GM    IARAF+PF+TTKP+G G GLGLSMVYGF RQSGG+A I S    
Sbjct: 614 VSISVSDNGSGMPVDVIARAFDPFFTTKPIGVGTGLGLSMVYGFARQSGGHARIYSEVGT 673

Query: 555 GTRVSMLFPR---SHEPVPDEPAPVPLSQRMARGERLLLVDDELDLRAVMREYLTERGFD 611
           GT V M  PR         D PA   + Q    GE +L+VDDE  +R +M E L + G+ 
Sbjct: 674 GTNVCMYLPRYEGGECAADDLPASNQVPQSTGVGEIVLVVDDEASVRMLMVETLVDLGYR 733

Query: 612 VTDVGDANSALERFRHGGPFDLVITDIGLPGGFSGRQVAKAMRMQLAQQKILF 664
           V    D   A+E  +      L++TD+GLP G +GRQVA A R+     ++LF
Sbjct: 734 VLHAADGPQAVELLQANRSVALLVTDVGLPKGMNGRQVADAGRLINPSLRVLF 786



 Score = 33.1 bits (74), Expect = 5e-05
 Identities = 50/196 (25%), Positives = 72/196 (36%), Gaps = 25/196 (12%)

Query: 150 EGAEPLWCAFGYAPLHDELGNVAGFLHTVIETTASVEAHRHWREQVQSFERQVAQHVAER 209
           +  E  W      P+HD  G V  F  + ++ T   E          S   ++A  V E 
Sbjct: 73  KNGEAFWNRLSIGPVHDSAGEVIYFFASQVDATFERERLLGLESSNASLSAELAVRVREV 132

Query: 210 EQFWLLSREA----------MMMLTPEL--KLH-GANPAWYRILGWTQEQVQAMSVMELV 256
           E      R A          + + T  L   +H   N      L +T E +Q     E V
Sbjct: 133 ETGEARLRAATDAAELGIWRLDLTTSSLYASVHCKRNFGRGESLPFTYEDLQ-----EAV 187

Query: 257 HPTERTEVRLAVSGLFQCSHAEQLEIRLRHRDGHYHWFRWSARFD----GSLLTAVG--R 310
           HP +   +R AV    +     ++E R+   DG   W R   R +    G  L+  G  +
Sbjct: 188 HPDDLPRMRSAVLRTIETGDDYRIEYRVVRPDGQLAWVRIVGRLERDASGHPLSMAGTSQ 247

Query: 311 DITADREEAARQAEAL 326
           DIT D   A R+ E L
Sbjct: 248 DIT-DVMLALRRNELL 262