Pairwise Alignments

Query, 538 a.a., Response regulator/sensor histidine kinase from Pseudomonas putida KT2440

Subject, 795 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  236 bits (601), Expect = 3e-66
 Identities = 178/531 (33%), Positives = 266/531 (50%), Gaps = 46/531 (8%)

Query: 19  LAADTSRLLSSAGINSLCAVDLANLQARLTEGAGLAIIAEQVFSQGPSTLLQAFIDQQPS 78
           L A  ++ L+   +N      L   + RL++ + L ++ E               DQ+  
Sbjct: 295 LLAVLNKDLTPVALNPAWEASLGFSRERLSQSSLLHLLPEH--------------DQEQL 340

Query: 79  WSDLPIVLLTQGAWSAAGVNH--HPVGN---LLWLVTPYENAQLLHMTQSALRNRRRQYV 133
            ++L    L  G  SA  V    H  G    L W+V P E+  L  + +     R     
Sbjct: 341 LTEL--AALAHGRTSARFVGRILHAGGQQRWLSWVVVP-EDTLLYVVARDITSEREAALS 397

Query: 134 TRDQLHGMQQRLDSRPSTPEEVQDRGEFARCQARKMEAIGQLAGGVAHDFNNLLTSISGS 193
             D    ++++++ R        +R E A  Q +++EA+GQL  GVAHDFNNLLT I   
Sbjct: 398 LADANARLREQINER--------ERIEAALQQMQRLEAVGQLTAGVAHDFNNLLTVILTG 449

Query: 194 FELIQRRLRQGRSDGLDGVLCMGREAVSRAARLTHRLLAFSSRQSLHSQRIDLHTLLKA- 252
              ++R L +   D     L   REA  R A+LT +LLAFS RQ L    ++L+  L   
Sbjct: 450 ASFLERDLAKADLDKARTRLTHIREAGERGAKLTSQLLAFSRRQRLEPVPLNLNRTLAGL 509

Query: 253 -ERLGARLSPSITLQVHAAKDLWPVEADDQQLQEALDNLLLNAREAMPNGGLLRIEANNH 311
            E L   L  +I++++     LW    D  Q +  + NL +NAR+AM +GG L +   N 
Sbjct: 510 EELLRRTLGGNISVRLDLDLALWQALTDPTQTEMIILNLAINARDAMSDGGQLTLTTRNT 569

Query: 312 HIATEQAADGALRTGDYVRLRITDSGQGMAQSTLEHAFEPFFSTKATGQGIGLGLSMVYG 371
            I            G+YV L I D+G GM++  L   FEPFF+TK  G+G GLGL+ V+G
Sbjct: 570 LIDKRPQRPEDPDPGEYVMLSIRDTGCGMSEEVLAKVFEPFFTTKDIGKGSGLGLAQVFG 629

Query: 372 FSKQSHGHITLSSEIGQGTQVELYLPRHVDQALSYSEPVPA------RQDGCSRHVLVVE 425
           F+KQS G + + + +G+GT+V +YLP   ++ +  +EPVPA       + G +R VL+V+
Sbjct: 630 FAKQSGGGVRIDTTLGRGTEVAVYLPAVKEEMV--NEPVPAVLSQSISESGHNRTVLLVD 687

Query: 426 DDPHVRQLLCQALGENGFPCQSAADANEGLKVLRSAQPVDLLITDVGLPGMNGRQLAEIA 485
           DD  VR +L   L + G+  + A    + L +L     +DLL+TD  +P  NG QLA  A
Sbjct: 688 DDHLVRDMLGDVLRQYGYQVRQAHSGEQALALL--DDDIDLLLTDFAMPEFNGAQLALAA 745

Query: 486 RSLRPRLPVLFITGYAETAMAREGFLGADMHLICKPFELQQLQARVTHILG 536
           R   PRLPV+F+TGYAE     +G       +I KP +  +L   +  +LG
Sbjct: 746 RERYPRLPVVFLTGYAEL----QGLELPGSLVIQKPVQADELARALNEMLG 792



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 4/107 (3%)

Query: 421 VLVVEDDPHVRQLLCQALGENGFPCQSAADANE-GLK-VLRSAQPVDLLITDVGLPGMNG 478
           +L+VED     +L    L  +G   QS    +  G++  LR A+  DL++ D  LPG +G
Sbjct: 8   LLMVEDSSMDAELTLMRLERSGLHVQSQLVFDHAGVEHALRQAR-YDLILCDCVLPGSSG 66

Query: 479 RQLAEIARSLRPRLPVLFITG-YAETAMAREGFLGADMHLICKPFEL 524
            ++  IA+ L P +P +F++G Y E        LGA  +++ K   L
Sbjct: 67  TEVLAIAQRLAPDIPFIFLSGIYGEEHAVEMIRLGATDYVLKKNLPL 113