Pairwise Alignments

Query, 351 a.a., conserved protein of unknown function containing tetratricopeptide repeat domain from Pseudomonas putida KT2440

Subject, 574 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 8/193 (4%)

Query: 164 YQQALEQQPEDAD-AQVHLARLYLHENDYTHAAAALQRALAVAPGN--LDALATQVRLLE 220
           Y + L Q+    D A ++L R+    ND     AAL     V PGN  L A   Q  +L 
Sbjct: 309 YLEELIQRESHVDSAHLNLGRIAEERND---PQAALLEYAQVGPGNDYLPAQLRQADILM 365

Query: 221 RQGHHDASRQVLGKALALSPDSAFLQYELGL-WLKRHEQREYALLALSRAVELDPDNADY 279
             G  D + + L  A    PD A   Y +    L  + Q E A   L +A+   PD+ + 
Sbjct: 366 SNGRTDEAEKRLAAARDAEPDYAIQLYLIQAETLSANNQSERAWKLLQQALLQFPDDLNL 425

Query: 280 RYTLAVTLHELDQLDAAQKQLETVLNRQPANRRA-RVLLIQYWKESGQLQNVQVSLAELE 338
            YT A+   + + L   +K L  ++ R P N  A   L       + +    +V + +  
Sbjct: 426 LYTRAMQAEKRNDLAQMEKDLRLIIKRDPDNAMALNALGYTLSDRTTRYAEAKVLIEQAH 485

Query: 339 RQNPDDPALQQGL 351
           + NP+DPA+   L
Sbjct: 486 KLNPEDPAVLDSL 498



 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 1/186 (0%)

Query: 161 LEQYQQALEQQPEDADAQVHLARLYLHENDYTHAAAALQRALAVAPGNLDALATQVRLLE 220
           ++ + + L++ P+++      A L L ++D   AA  L        G +  +  + RLL+
Sbjct: 172 MKSFDRLLQKHPKNSQLIFGKA-LLLQQDDEADAALKLLEQNPPEEGEIAPILLRARLLQ 230

Query: 221 RQGHHDASRQVLGKALALSPDSAFLQYELGLWLKRHEQREYALLALSRAVELDPDNADYR 280
                  +  +L K++   P+   L+      L   ++ E A +  +  V+  PD+ + R
Sbjct: 231 NLNRGKEAIPLLEKSIKKYPEDKRLRLTYARMLVEQDRMEDAKVQFASLVQQYPDDDELR 290

Query: 281 YTLAVTLHELDQLDAAQKQLETVLNRQPANRRARVLLIQYWKESGQLQNVQVSLAELERQ 340
           Y+LA+   E    D A+  LE ++ R+     A + L +  +E    Q   +  A++   
Sbjct: 291 YSLALVCLEAKAWDEAKGYLEELIQRESHVDSAHLNLGRIAEERNDPQAALLEYAQVGPG 350

Query: 341 NPDDPA 346
           N   PA
Sbjct: 351 NDYLPA 356



 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 40/180 (22%), Positives = 69/180 (38%), Gaps = 33/180 (18%)

Query: 205 APGNLDALATQVRLLERQGHHDASRQVLGKALALSPDSAFLQYELGLWLKRHEQREYALL 264
           AP +L+A       L R G +D S   + K L    D+ F    L       + R+  + 
Sbjct: 114 APDDLEAQRAAAVQLARAGRYDDSMIYMEKVLQGKGDTHFDFLALSAADTDQDTRDGLMK 173

Query: 265 ALSRAVELDPDNADYRYTLAVTLHELDQLDAAQK-------------------------- 298
           +  R ++  P N+   +  A+ L + D+ DAA K                          
Sbjct: 174 SFDRLLQKHPKNSQLIFGKALLLQQDDEADAALKLLEQNPPEEGEIAPILLRARLLQNLN 233

Query: 299 -------QLETVLNRQPANRRARVLLIQYWKESGQLQNVQVSLAELERQNPDDPALQQGL 351
                   LE  + + P ++R R+   +   E  ++++ +V  A L +Q PDD  L+  L
Sbjct: 234 RGKEAIPLLEKSIKKYPEDKRLRLTYARMLVEQDRMEDAKVQFASLVQQYPDDDELRYSL 293