Pairwise Alignments

Query, 1059 a.a., Multidrug efflux RND transporter MexF from Pseudomonas putida KT2440

Subject, 1052 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  879 bits (2270), Expect = 0.0
 Identities = 457/1055 (43%), Positives = 676/1055 (64%), Gaps = 20/1055 (1%)

Query: 4    SKFFITRPIFAAVLSLVLLIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETV 63
            S+ FI RP+ A V+S+V+L+ G+IS+  LP+++YP++ PP V V AN+ GA+ K + +TV
Sbjct: 3    SEVFIKRPVTAMVISIVILLVGAISIVNLPVTQYPDITPPVVSVSANYTGADAKTVEQTV 62

Query: 64   AAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKLPEE 123
            A P+E  + G   M Y+SS +T+ G++ + +TF +GTD+D A + VQNRV+  +P+LPE 
Sbjct: 63   ATPIETQVNGTPGMAYISSTNTSTGQMNMNVTFDVGTDIDIATLDVQNRVSIAEPRLPEA 122

Query: 124  VTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAILNIKDELARLGGVGDVQLFGMG 183
            V R+G+TV K +P + MV+ L SP   +D  +LSNY  + +KD L R+ GVGD+   G  
Sbjct: 123  VKRLGVTVRKRNPSIMMVISLYSPKGTHDTKFLSNYTNIFVKDALLRVPGVGDINAIGQ- 181

Query: 184  DYSLRVWLDPNKTASRNLTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQGRL 243
            D+S+RVWL P+K A  N++ S+V AAI+EQN QVAAG +G  P   S +F+  I   G+L
Sbjct: 182  DFSMRVWLKPDKLAQYNISTSEVTAAIQEQNLQVAAGTVGGMPQLASQTFEYPITVNGKL 241

Query: 244  VNEEEFENIIIRAG-ADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGSNA 302
              +EEFE+II+R     G +  LKD+AR+E G   Y   S +N +PA  + ++Q PGSNA
Sbjct: 242  ERKEEFEDIIVRTDPTSGSLVYLKDVARIEFGEFDYGRFSTVNGEPAAILLVYQAPGSNA 301

Query: 303  IEISDEVRAKMAELKKDFPEGMDYSIVYDPTIFVRGSIEAVVHTLFEALVLVVLVVILFL 362
            I+ ++ +   + E+K  FP  MDY + ++    V+ SI+ V+HTL EAL+LV++VV LFL
Sbjct: 302  IDTAEGIYNALDEMKATFPADMDYVVPFESVSVVQVSIDEVLHTLVEALILVIIVVFLFL 361

Query: 363  QTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN 422
            Q+WRA++IP+LA+PVS++GTF      GF++N L++FG VLAIGIVVDDAIVVVE  +  
Sbjct: 362  QSWRATLIPILAIPVSIVGTFIFFIPLGFTINTLTMFGFVLAIGIVVDDAIVVVEAAQHY 421

Query: 423  I-GLGLKPLEATQKAMSEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTV 481
            I    +   EAT  AM ++T P+IA AL+L AVF+P  FI G+ G+ Y+QFA+TIAIS +
Sbjct: 422  IDSKRVSAKEATLLAMKDITAPVIAIALILAAVFIPVGFIPGIVGRMYQQFAITIAISVL 481

Query: 482  ISAFNSLTLSPALAAVLLKDHHAPKDRFSRFLDKLLGSWLFSPFNRFFDRASHSYVGGVR 541
            ISAF +LTL+PAL ++LLK     KD  S+ ++K      F  FN +F+R + SY  GV+
Sbjct: 482  ISAFVALTLTPALCSLLLKPMEVKKD--SKGINKF-----FYKFNTWFERVTSSYGNGVK 534

Query: 542  RVIRSSGIALFV----YAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTE 597
            + I+++ + L +    YAG +GL    F   PTGF+P +D+  L    +LP+++S  RT 
Sbjct: 535  KSIKATPLVLIILVCIYAGTVGL----FQVKPTGFLPTEDEGRLFISLELPESSSTSRTR 590

Query: 598  AVIKRMSEIALKQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIA 657
            A++  M E+     G+ +     GL+   F+   NSG  F  + P+DER+DPS+    + 
Sbjct: 591  AIMDEMVEMITTTDGIRNVTGIGGLNAINFSFKSNSGTFFVQMDPWDERQDPSKQLFGLI 650

Query: 658  AALNAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLGYEALYKETQNIIAKSHN 717
              LN +FA I++A I + PPP + GLG  GGF   +E R     +   +     +  ++ 
Sbjct: 651  GQLNQKFAAIKEANIIVVPPPAIPGLGQTGGFSFMLEQRSGGDIKEFEQVVGQFLGAANQ 710

Query: 718  VPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAITDIFDTLQVYLGSLYTNDFNRFGRTY 777
             PE+A  ++ +    P     +DREKAK  GVAI+D+F T+  Y+GS Y NDF R+GR +
Sbjct: 711  RPEIAMAYSFFTAKTPGYHVTVDREKAKKLGVAISDVFSTMSTYMGSAYVNDFTRYGRNF 770

Query: 778  QVNVQAEQQFRLDAEQIGQLKVRNNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEING 837
            +V  QA+  +R+D + + Q  V N  G+ +PL   +          + HYN F + EING
Sbjct: 771  RVVAQADTAYRMDIKDLDQYYVMNREGKSVPLGAVVDYEIVENAPVINHYNLFRSTEING 830

Query: 838  AAAPGYSSGQAEAAIEKLLKEELPNGMTFEWTDLTYQQILSGNTALLVFPLCVLLAFLVL 897
             AA GYSSGQA AA+E++  E LP G  ++++ L+ +++ SGNT +L+F L ++L  L+L
Sbjct: 831  NAAEGYSSGQALAALEEVAAEVLPAGYGYDFSGLSREELASGNTTILIFALAIILVSLLL 890

Query: 898  AAQYESWSLPLAVILIVPMTLLSAITGV-IVSGGDNNIFTQIGLIVLVGLACKNAILIVE 956
            AA YESWS+P +V+L +P+    AI  +  +   DNN++ QIGL+ L+GLA KNAILIVE
Sbjct: 891  AALYESWSVPFSVLLALPLGAFGAILALTFLPKLDNNVYAQIGLVTLIGLAAKNAILIVE 950

Query: 957  FAKDEQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFSSGAGSEMRHAMGVAVF 1016
            FAK+    G+  LAA +EA +LRLRPI+MTS+AFI+GVVPL  S+GAG+  R  +G  V 
Sbjct: 951  FAKERVDAGMPLLAATIEAVKLRLRPIVMTSLAFILGVVPLALSNGAGAVARQTIGWTVI 1010

Query: 1017 SGMIGVTVFGLFLTPVFFFLIRRFV-ERRQARKAE 1050
             GM+  T   +F+ PV + +I +    R++ R+ E
Sbjct: 1011 GGMLAATFLAIFVVPVLYVVITKIAYGRKKLRELE 1045