Pairwise Alignments

Query, 403 a.a., Type II secretion pathway protein XcpS from Pseudomonas putida KT2440

Subject, 402 a.a., Putative type II secretion system protein F from Xanthobacter sp. DMC5

 Score =  186 bits (471), Expect = 1e-51
 Identities = 124/398 (31%), Positives = 211/398 (53%), Gaps = 5/398 (1%)

Query: 10  YSLKALGRQG-VVQLQIDAEDADQARRQAEDQGL---RVLSLRSSGGALRGMAWRREAAF 65
           +S +AL + G +V  +I A    + RR+ E  GL       L+       G ++    A 
Sbjct: 4   FSYRALTQAGQIVSGEIAAPTEAEVRRRIEFLGLVPVETTPLKEKKDNAFGFSFGAPKAE 63

Query: 66  DLVLFSQELSTLLNAGLPLIDALESLAEKSPAATARKVLAELVRQLYEGRSLSQALGQQP 125
           D+ LF+++L+ LL AG  L +ALE L   +     R V  ++   +  G SL++AL   P
Sbjct: 64  DVTLFTRDLALLLRAGARLDEALELLTGDTDLGRMRAVARKIRADVLAGESLAEALASHP 123

Query: 126 RVFPPLYVALVQSSERTGALGDALTRYISYRQRLDLVRQKLVGASVYPLLLLLVGGGVVL 185
            +FPP+YVALV+  E +G +   L    + RQR + +R+K+V A  YP  +L+  GGV++
Sbjct: 124 ALFPPVYVALVRVGEASGTVDRMLELVAAERQRAEELRRKVVSALQYPAFVLVAAGGVLV 183

Query: 186 FLLGYVVPRFSQVFEGMGTELPWLSRVLMQVGLFLHAQQAPLALGTVGGVAALWLLRRHP 245
           F L +V+P+FS V   MG +L  + +VL+ +   L A  A + +  V   A  +L  R  
Sbjct: 184 FFLMFVMPQFSSVLRDMGAKLDPMVQVLLDLSDGLQAHAAAVGIAAVVLPALAFLALRRQ 243

Query: 246 RVRYWASCQLRRLPALHQRLMMYELARFYRSLGILLQGGIPILTAMGMARGLL-GNAAAQ 304
            VR   +  L +LP +   L+    A F R+L ILL  G+ +  A+ +   ++     A 
Sbjct: 244 EVRGVVTGALSKLPLVRTVLLFRRSAVFCRNLSILLGNGVTLTAALRIIVDVMAAGEEAS 303

Query: 305 GLEQASQRVGEGLPLSDALAAGHLVTPVSLRLLRAGEQSGNLGEMLERCADFHDQEIGRW 364
              +A+ RV  G  LSDA A G ++ P+++R+LR GE++G L  +  R ADF+++++ R 
Sbjct: 304 VWAKAADRVRHGGRLSDAFAEGDVLPPMAIRMLRLGEETGQLALLSGRIADFYEEKLQRA 363

Query: 365 VEWFVKLFEPLLMTFIGLLIGLIVILMYMPIFELASSI 402
           +   V +  P  +  I +++G +++ +   +  ++ SI
Sbjct: 364 LARVVAVIGPAAIVTISVVVGGLIVSVMTALLSVSQSI 401