Pairwise Alignments

Query, 403 a.a., Type II secretion pathway protein XcpS from Pseudomonas putida KT2440

Subject, 403 a.a., general secretion pathway protein GspF from Pseudomonas simiae WCS417

 Score =  174 bits (442), Expect = 3e-48
 Identities = 121/396 (30%), Positives = 203/396 (51%), Gaps = 6/396 (1%)

Query: 9   RYSLKALGRQGVVQL-QIDAEDADQARRQAEDQGLRVLSLRSSGG----ALRGMAWRREA 63
           RY  +A    G V+   ++A+    A      +GL  L ++  G     A   +   + +
Sbjct: 3   RYRYEAADANGNVEAGHVEADSQSAAFANLRSRGLTALLVQIEGNQQAAAGSSLFTAKLS 62

Query: 64  AFDLVLFSQELSTLLNAGLPLIDALESLAEKSPAATARKVLAELVRQLYEGRSLSQALGQ 123
             DL   +++L++LL A LPL  AL +  E++      + L+ +   +  G  L+ AL  
Sbjct: 63  DNDLAWATRQLASLLGASLPLEAALSATVEQAEKKHIAQTLSAVRADVRGGMRLADALAA 122

Query: 124 QPRVFPPLYVALVQSSERTGALGDALTRYISYRQRLDLVRQKLVGASVYPLLLLLVGGGV 183
           +PR FP +Y AL+ + E +G L   + R   Y +  + +R K++ A +YP ++ LV  G+
Sbjct: 123 RPRDFPSIYRALIAAGEESGDLAQVMERLADYIEERNNLRGKILTAFIYPGVVGLVSIGI 182

Query: 184 VLFLLGYVVPRFSQVFEGMGTELPWLSRVLMQVGLFLHAQQAPLALGTVGGVAALWLLRR 243
           V+FLL YVVP+    F     +LP L+  ++    F+ A       G VGG  +  L  R
Sbjct: 183 VIFLLSYVVPQVVSAFSQARQDLPGLTLAMLNASDFVRAWGGLCFAGMVGGFWSWRLYLR 242

Query: 244 HPRVRYWASCQLRRLPALHQRLMMYELARFYRSLGILLQGGIPILTAMGMARGLLGN-AA 302
           +P  R     ++ RLP + + ++    ARF  +L IL   G+P+L A+  AR  L N   
Sbjct: 243 NPVARLSWHSRVLRLPLIGRFVLGLNTARFASTLAILGGAGVPLLRALEAARQTLSNDRL 302

Query: 303 AQGLEQASQRVGEGLPLSDALAAGHLVTPVSLRLLRAGEQSGNLGEMLERCADFHDQEIG 362
           +Q +  A+ +V EG+ L+ ALA   +  PV + L+ +GE++G L  MLER A    ++I 
Sbjct: 303 SQCVNDATAKVREGVNLAPALAVEKVFPPVLIHLIASGEKTGALPPMLERAAQTLSRDIE 362

Query: 363 RWVEWFVKLFEPLLMTFIGLLIGLIVILMYMPIFEL 398
           R       L EPL++  +G ++ +IV+ + +PI E+
Sbjct: 363 RRAMGMTALLEPLMIVVMGAVVLVIVMAVLLPIIEI 398