Pairwise Alignments

Query, 403 a.a., Type II secretion pathway protein XcpS from Pseudomonas putida KT2440

Subject, 401 a.a., General secretion pathway protein F from Variovorax sp. SCN45

 Score =  172 bits (436), Expect = 2e-47
 Identities = 132/397 (33%), Positives = 207/397 (52%), Gaps = 10/397 (2%)

Query: 9   RYSLKALGRQGVVQL-QIDAEDADQARRQAEDQGLRVLSLR---SSGGALRGMAWRREAA 64
           R+  +A    G +Q    + E A   R Q  D+GL  L +R   + GGAL  ++ R  AA
Sbjct: 3   RFEYEAASASGELQRGTTEGESARSVRAQLRDRGLTPLDIREKAAGGGALSWLSPRLGAA 62

Query: 65  FDLVLFSQELSTLLNAGLPLIDALESLAEKSPAATARKVLAELVRQLYEGRSLSQALGQQ 124
            DL   ++EL++LL A L L  AL +  E++      + L+ +   +  G  L+ ALG++
Sbjct: 63  -DLCWATRELASLLGARLTLEAALVATIEQAERKHVAESLSAVCDSVRAGMRLADALGER 121

Query: 125 PRVFPPLYVALVQSSERTGALGDALTRYISYRQRLDLVRQKLVGASVYPLLLLLVGGGVV 184
           PR FP +Y ALV + E +G L   + R   Y +  D +R K++ A +YP ++  V   +V
Sbjct: 122 PRDFPQIYRALVSAGEDSGDLARVMERLADYLENRDNLRGKVLTAFIYPAIVGFVSLCIV 181

Query: 185 LFLLGYVVPRFSQVFEGMGTELPWLSRVLMQVGLFLHAQQAPLALGTV--GGVAALWLLR 242
           +FLLGYVVP+    F     ELP ++RV++    F+  +   L  G V    VAA  LLR
Sbjct: 182 VFLLGYVVPQVIGAFAQARQELPTITRVMLAASAFVR-EWGWLTAGVVVAAWVAARALLR 240

Query: 243 RHPRVRYWASCQLRRLPALHQRLMMYELARFYRSLGILLQGGIPILTAMGMARGLLGNA- 301
                  W    L R+P + +  +  + ARF  +L IL+  G+P+L A+  AR  L N  
Sbjct: 241 DAAHKLKWHGLIL-RMPMVGRFALGVDTARFASTLSILMDAGVPLLRALEAARQTLVNEW 299

Query: 302 AAQGLEQASQRVGEGLPLSDALAAGHLVTPVSLRLLRAGEQSGNLGEMLERCADFHDQEI 361
             + + +A+ RV EG PL+ AL A  +     + L+ +GE++G L  M ER A    +++
Sbjct: 300 LKRCVLEATGRVKEGTPLAAALKAQKIFPSNLVHLVASGEKTGALAAMFERAALNLSRDL 359

Query: 362 GRWVEWFVKLFEPLLMTFIGLLIGLIVILMYMPIFEL 398
            R       L EPL++  +G ++  IV+ + MPI E+
Sbjct: 360 ERRAMRLTTLLEPLMILAMGGVVMAIVLAVLMPIMEI 396