Pairwise Alignments

Query, 403 a.a., Type II secretion pathway protein XcpS from Pseudomonas putida KT2440

Subject, 393 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 71.2 bits (173), Expect = 5e-17
 Identities = 103/399 (25%), Positives = 176/399 (44%), Gaps = 46/399 (11%)

Query: 23  LQIDAEDADQARRQAEDQGLRVLSLRSSGGALRGMAWRREAAFDL--VLFSQELSTLLNA 80
           ++++A D  +AR     +G RVLS+R     L+   W R    +   +LF + L+ +L++
Sbjct: 17  IEVEAADERRARDAISGRG-RVLSVRRR---LKVGGWGRPLDRNERHILFIR-LAAMLDS 71

Query: 81  GLPLIDALESLAEKSPAATARKVLAELVRQLYEGRSLSQALGQQPRVFPPLYVALVQSSE 140
            + L +AL  +A        R+    +   +  G  L+ A+ +QPR FPP+ VALV    
Sbjct: 72  RVGLAEALRRIAAAF-RGRIRRTAERMADAVELGDDLADAMLRQPRSFPPVLVALV---- 126

Query: 141 RTGALGD----ALTRYISYRQRLDLVRQKLVGASVYPLLLLLVGGGVVLFLLGYVVPRF- 195
           R G  G+    AL     + ++L   RQ         +L ++  G V++     + P   
Sbjct: 127 RAGGFGEGTPAALRTAAEFERQLAGARQGFRSGLALAVLYVVTAGVVMVGTSFVLTPLLL 186

Query: 196 -SQVFEGMGTE--LPW---LSRVLMQVGLFLHAQQAPLALGTVGGVAALWLLRRHPRVRY 249
            ++VF   G E  + W   LS +   +   + A     AL  +GG+A         RV  
Sbjct: 187 ETEVFRRAGEEVNVDWVYLLSNLTTGLVAIVLA-----ALAVLGGLATAGRRAAPERV-- 239

Query: 250 WASCQLRRLPALHQRLMMYELARFYRSLGILLQGGIPILTAMGM-ARGLLGNAAAQGLEQ 308
                + R+P      +  +    +R L +L+ GG+PI  A+ + A G    A A  L  
Sbjct: 240 --DRLVMRIPLYRDIALGIQHHVIFRELSLLVAGGVPIDRALRLTADGAPAGALAADLID 297

Query: 309 ASQRVGEGLPLSDALAAGHLVTPVSLRLLRAGEQSGNLGEMLERCAD-FHDQEIGRWVEW 367
           A++ V  GLP +DA+ A   +       + A E    L + L   A+ + D  +      
Sbjct: 298 ATRAVAAGLPWTDAMRA---LPGTDRASIAAAENRVELAQSLSALAEQYRDLYLHA---- 350

Query: 368 FVKLFEPLLMTFIGLLIGLIVILMY----MPIFELASSI 402
            V + EP+L     +++G+  I+M+    +PI +LA  I
Sbjct: 351 -VAVAEPVLRGLSVVVVGVAGIVMFGLTIVPILQLAEHI 388