Pairwise Alignments

Query, 475 a.a., Sigma-54 dependent transcriptional regulator/response regulator from Pseudomonas putida KT2440

Subject, 464 a.a., Regulatory protein AtoC from Xanthobacter sp. DMC5

 Score =  292 bits (747), Expect = 2e-83
 Identities = 175/467 (37%), Positives = 267/467 (57%), Gaps = 17/467 (3%)

Query: 1   MEHSILVVEDDEILADNIRTYLSLKGYEVIVCHSAELALEQIKRAQPDAVLTDNSLPGMS 60
           M   IL+V+D+    + +   L+ +G+E +  ++   AL        D VL+D  +P   
Sbjct: 4   MAAKILIVDDEVRHGEVLEAALAERGFEAVSTNTVAKALAYCASQPVDLVLSDLRMPDRG 63

Query: 61  GHDLLRTLVAQAPDLKVIMMTGYGNVEDAVQAMKEGAFHYLTKPVVLAELKLTLDKALAT 120
           G DLLR L  + P+L VI+MT Y +V  AV  +K+GAF Y+ KP+ L ++  T+ +AL  
Sbjct: 64  GADLLRALKHEQPELPVIIMTAYASVRGAVDLVKDGAFDYVAKPLDLDDVVATIARALRL 123

Query: 121 ERMERTLSFYQEREAQKSGLQALIGESPVMLTLKHTLRQVLDAERRMASDDLPPVLIEGE 180
           + +E   S  +    ++     L+GES V     H LRQV +     AS     VL+ GE
Sbjct: 124 KAVESENSRLRSELEERYRFDNLLGESAVF---HHVLRQVTEVAPSRAS-----VLLLGE 175

Query: 181 TGTGKELVARALHFDGSRSKGPFIEFNCASIPANLLEAELFGHEKGAFTDAKERRVGLVE 240
           +GTGKELVARA+H++  R   PF+  NCA+IP  L+E+ELFGH KGAFT A   R G   
Sbjct: 176 SGTGKELVARAIHYNSPRRDLPFVAVNCAAIPETLIESELFGHVKGAFTGATGVREGRFA 235

Query: 241 AADGGTLFLDEIGEMDLVLQAKLLKLLEDRSIRRIGAVKERKVDLRVISATNCNLEQMVQ 300
           AA+ GTLFLDEI +M L +QAK+L+ L+++S   +G+ K   VD+R+I+AT+ +L++ + 
Sbjct: 236 AANQGTLFLDEIADMPLPVQAKVLRALQEQSFEPVGSSKSVSVDVRIIAATHKDLQKEIA 295

Query: 301 QGKFRRDLFFRLRIIALKVPRLYSRGQDILLLARHFLAHHSRRYGKPNLRFSAEAESLLL 360
            G FR DL++RL +  + +P L  R  DI+LLA HFLA  +R  GK     + EA+++L 
Sbjct: 296 AGTFRMDLYYRLAVFPITLPPLRERTDDIVLLADHFLAAATRDMGKRVKGLTPEAQAMLT 355

Query: 361 GYSWPGNVRELRNMLEQTVLLAPNEVVQAHQLNLCMTLVDEPLAQQPMAAMFEMPRHEPE 420
            Y WPGNVREL+N +E+  ++A  ++V    L L     D  +    +    +       
Sbjct: 356 RYRWPGNVRELQNCMERAAIVARGDLVGPGDLLLFEANGDTDVQSHTLNGDLD------- 408

Query: 421 PGTSLPDMERDLVCKTLDRTDWNVTKSARMLGLSRDMLRYRIEKLGL 467
             + L  +ER+ V + L  +     ++A  LG++   L +RI+KL +
Sbjct: 409 --SELSRIEREFVLQALKDSGGVQARAAEKLGITERSLWHRIKKLAI 453