Pairwise Alignments

Query, 475 a.a., Sigma-54 dependent transcriptional regulator/response regulator from Pseudomonas putida KT2440

Subject, 442 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas putida KT2440

 Score =  284 bits (727), Expect = 4e-81
 Identities = 169/465 (36%), Positives = 262/465 (56%), Gaps = 31/465 (6%)

Query: 4   SILVVEDDEILADNIRTYLSLKGYEVIVCHSAELALEQIKRAQPDAVLTDNSLPGMSGHD 63
           ++L+VEDD  +    +  L+L+        SAE ALE+I       V++D  LPG+ G +
Sbjct: 7   TVLIVEDDPHVLLGCQQALALEDIACEGVGSAEQALERIGDDFAGIVVSDIRLPGIDGLE 66

Query: 64  LLRTLVAQAPDLKVIMMTGYGNVEDAVQAMKEGAFHYLTKPVVLAELKLTLDKALATERM 123
           LL  L A+   L V+++TG+G+++ AV AM+ GA+ ++ KP     L   + +AL    +
Sbjct: 67  LLNRLKARDRSLPVVLITGHGDIDMAVGAMRNGAYDFMEKPFSPERLVDVVRRALEQRGL 126

Query: 124 ERTLSFYQEREAQKSGLQA-LIGESPVMLTLKHTLRQVLDAERRMASDDLPPVLIEGETG 182
            R +   + + A++S L+  +IG SP M  L+  +  V D            VLIEGETG
Sbjct: 127 SREVVALRRQLAEQSSLEGRIIGRSPAMEHLRELIANVADTSAN--------VLIEGETG 178

Query: 183 TGKELVARALHFDGSRSKGPFIEFNCASIPANLLEAELFGHEKGAFTDAKERRVGLVEAA 242
           TGKELVAR LH    R   PF+  NC  +P NL E+E+FGHE  AFT A +RR+G +E A
Sbjct: 179 TGKELVARCLHDFSRRQSHPFVALNCGGLPENLFESEIFGHEANAFTGAGKRRIGKIEHA 238

Query: 243 DGGTLFLDEIGEMDLVLQAKLLKLLEDRSIRRIGAVKERKVDLRVISATNCNLEQMVQQG 302
           +GGTLFLDE+  M + LQ KLL++L++R++ R+G+ +   VD RVI+AT  +L+ + Q G
Sbjct: 239 NGGTLFLDEVESMPINLQIKLLRVLQERTLERLGSNQSIPVDCRVIAATKADLDALGQSG 298

Query: 303 KFRRDLFFRLRIIALKVPRLYSRGQDILLLARHFLAHHSRRYGKPNLRFSAEAESLLLGY 362
           +FR DL++RL ++ L++P L  R +DIL L  HFL   + R+ +      ++  S L+ +
Sbjct: 299 QFRSDLYYRLNVVTLELPPLRERREDILQLFEHFLQQSALRFDRETPTLDSQTLSRLMAH 358

Query: 363 SWPGNVRELRNMLEQTVLLAPNEVVQAHQLNLCMTLVDEPLAQQPMAAMFEMPRHEPEPG 422
            WPGNVRELRN+ E+  L  P                  P        +F          
Sbjct: 359 DWPGNVRELRNVAERYALGLP-------------AFKKGPSGGANQGLLF---------A 396

Query: 423 TSLPDMERDLVCKTLDRTDWNVTKSARMLGLSRDMLRYRIEKLGL 467
            ++   ER+L+   L RT  N++++++ LG+++  L  +++K GL
Sbjct: 397 EAVEAFERNLLTDALQRTGGNLSQASQELGMAKTTLFDKVKKYGL 441