Pairwise Alignments

Query, 475 a.a., Sigma-54 dependent transcriptional regulator/response regulator from Pseudomonas putida KT2440

Subject, 470 a.a., nitrogen regulation protein NR(I) from Dickeya dianthicola ME23

 Score =  276 bits (706), Expect = 1e-78
 Identities = 178/477 (37%), Positives = 261/477 (54%), Gaps = 27/477 (5%)

Query: 5   ILVVEDDEILADNIRTYLSLKGYEVIVCHSAELALEQIKRAQPDAVLTDNSLPGMSGHDL 64
           + +V+DD  +   +   L+  G       +   AL  +    PD +L+D  +PGM G  L
Sbjct: 6   VWIVDDDSSIRWVLERALTGAGLTCATFDNGTQALNALTTQTPDVLLSDIRMPGMDGLAL 65

Query: 65  LRTLVAQAPDLKVIMMTGYGNVEDAVQAMKEGAFHYLTKPVVLAELKLTLDKALATERME 124
           L+ +  + P L VI+MT + +++ AV A ++GAF YL KP         +D+A+A   +E
Sbjct: 66  LQQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKP-------FDIDEAVAL--VE 116

Query: 125 RTLSFYQEREAQKSGLQALIGESPVMLTLKHTLRQVLDAERRMASDDLPPVLIEGETGTG 184
           R +S Y E++ Q +  Q + G +  ++     ++ V     R++   +  VLI GE+GTG
Sbjct: 117 RAISHYMEQQ-QPARSQPISGPTTDIIGEAPAMQDVFRIIGRLSRSSIS-VLINGESGTG 174

Query: 185 KELVARALHFDGSRSKGPFIEFNCASIPANLLEAELFGHEKGAFTDAKERRVGLVEAADG 244
           KELVA ALH    R+K PFI  N A+IP +L+E+ELFGHEKGAFT A + R G  E ADG
Sbjct: 175 KELVAHALHRHSPRTKAPFIALNMAAIPKDLIESELFGHEKGAFTGANQIRQGRFEQADG 234

Query: 245 GTLFLDEIGEMDLVLQAKLLKLLEDRSIRRIGAVKERKVDLRVISATNCNLEQMVQQGKF 304
           GTLFLDEIG+M L +Q +LL++L D    R+G     KVD+R+I+AT+ NLE  VQ+GKF
Sbjct: 235 GTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAAVKVDVRIIAATHQNLELRVQEGKF 294

Query: 305 RRDLFFRLRIIALKVPRLYSRGQDILLLARHFLAHHSRRYGKPNLRFSAEAESLLLGYSW 364
           R DLF RL +I + +P L  R +DI  LAR+FL   +R  G        E E+ L    W
Sbjct: 295 REDLFHRLNVIRVHLPPLRERREDIPRLARYFLQATARELGVEPKNLHPETEAALTRLPW 354

Query: 365 PGNVRELRNMLEQTVLLAPNEVVQAHQLNLCMTLVDEP--------------LAQQPMAA 410
           PGNVR+L N      ++A  + V    L   +     P              LAQ    A
Sbjct: 355 PGNVRQLENTCRWLTVMAAGQEVLIQDLPPELFETTAPDATVHVMPDSWATLLAQWADRA 414

Query: 411 MFEMPRHEPEPGTSLPDMERDLVCKTLDRTDWNVTKSARMLGLSRDMLRYRIEKLGL 467
           +     H+     + P+MER L+   L  T  +  ++AR+LG  R+ L  ++++LG+
Sbjct: 415 L--RSGHQNLLAEAQPEMERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 469