Pairwise Alignments

Query, 339 a.a., Transcriptional regulator, LacI family from Pseudomonas putida KT2440

Subject, 367 a.a., HTH-type transcriptional repressor CytR from Xanthobacter sp. DMC5

 Score =  129 bits (325), Expect = 9e-35
 Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 11/308 (3%)

Query: 13  TLAEVARLSGVSPITASRALRGVST--VAPDLVEKVIAAAANLGYVANPAARALASARSQ 70
           TL  VA   GV   T +RAL    +  ++ D+VEKV A A   GY  +  A +L + RS+
Sbjct: 16  TLQSVADAVGVHRSTVARALDPEQSRRISADVVEKVQAEARRQGYRPDAVASSLRTGRSR 75

Query: 71  SVVVLIPSLSNQLFIDTLEAIHEVMRPRGLEVLIGNYHYDLAEEENLIRNYLAYQPCGIL 130
            + V++P L+N +F   L  I   +  RG  +++ +   D A + +++   +A +  G++
Sbjct: 76  LIGVVVPDLANPVFAPILGGIGATLAARGYSMMVADSGEDEAGQADIVEKLIARRVDGLV 135

Query: 131 LTGFERSDAARQMLVASGVPCVHMMELNGEPG-ALSVGFSQHQAGRA-AARHLIERGRKR 188
           L   +R DA   + + +GVP V  +   GE G   S   S    G A A  HL   G +R
Sbjct: 136 LATAKRDDATVSLCLKAGVPTV--LVNRGEDGLRASTVVSDDTGGIAVAVAHLAGLGHRR 193

Query: 189 LAFIAA--QLDPRVMQRAEGFRQALAEAGLQAAELEVLAPEPSSIALGSVLFSQLMQQAP 246
           +  +A   +L   V++R  GF  A+A AGL A    V      +   G V  ++L+ + P
Sbjct: 194 IGHLAGPERLSTGVLRR-RGFADAMAAAGLPAD--AVTTATAYNREAGRVAAAELLDRWP 250

Query: 247 DVDGIFFCNDDLAQGAVLQALRQGVEVPRQVAMVGFNDLPASAHMVPRLTSIRTPRAAVG 306
           D+  I   ND +A GA  +A ++G+ +P+ +++VG ND+P    + P LT++R    A+G
Sbjct: 251 DITAIAASNDLIALGAYQEAQQRGLRIPQDLSIVGHNDMPLVDMVAPPLTTVRIGHEAMG 310

Query: 307 RGAAQALL 314
             AA  LL
Sbjct: 311 ARAASILL 318