Pairwise Alignments

Query, 339 a.a., Transcriptional regulator, LacI family from Pseudomonas putida KT2440

Subject, 341 a.a., DNA-binding transcriptional regulator CytR from Escherichia coli ECRC62

 Score =  125 bits (313), Expect = 2e-33
 Identities = 101/339 (29%), Positives = 162/339 (47%), Gaps = 24/339 (7%)

Query: 13  TLAEVARLSGVSPITASRALRGVSTVAPDLVEKVIAAAANLGYVANPAARALASARSQSV 72
           T+ +VA  + VS  T SRAL     V+     +V  AA  +GY+  P  R +    S+++
Sbjct: 11  TMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTI 70

Query: 73  VVLIPSLSNQLFIDTLEAIHEVMRPRGLEVLIGNYHYDLAEEENLIRNYLAYQPCGILLT 132
           +V++P + +  F + +  I       G  VLIG+  +   +E+  I   +  Q  G+LL 
Sbjct: 71  LVIVPDICDPFFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLL 130

Query: 133 G----FERSDAARQMLVASGVPCVHMMELNGEPGALSVGFSQHQAGRAAARHLIERGRKR 188
           G    F+ S   ++ L     P V   E   E    +V      A   A  +L E+G KR
Sbjct: 131 GSRLPFDASIEEQRNLP----PMVMANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKR 186

Query: 189 LAFIAAQLD-PRVMQRAEGFRQALAEAGLQAAELEVLAPEPSSIALGSVLF---SQLMQQ 244
           +  IA   + P    R +G+ QAL   G+          +P  IA G   F   S+ MQQ
Sbjct: 187 IGCIAGPEEMPLCHYRLQGYVQALRRCGIMV--------DPQYIARGDFTFEAGSKAMQQ 238

Query: 245 APDVD----GIFFCNDDLAQGAVLQALRQGVEVPRQVAMVGFNDLPASAHMVPRLTSIRT 300
             D+      +F  +D +A GA+ QA RQG++VP  ++++GF+++  +    P LT+I  
Sbjct: 239 LLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQ 298

Query: 301 PRAAVGRGAAQALLALLDGKRVTNAQQDLGFELMVREST 339
           PR  +GR A   LL  + G+ V +  + +  EL++R ST
Sbjct: 299 PRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIRGST 337