Pairwise Alignments

Query, 339 a.a., Transcriptional regulator, LacI family from Pseudomonas putida KT2440

Subject, 356 a.a., DNA-binding transcriptional regulator CytR from Dickeya dadantii 3937

 Score =  134 bits (337), Expect = 3e-36
 Identities = 104/332 (31%), Positives = 159/332 (47%), Gaps = 10/332 (3%)

Query: 13  TLAEVARLSGVSPITASRALRGVSTVAPDLVEKVIAAAANLGYVANPAARALASARSQSV 72
           T+ +VA  +GVS  T SRAL     V+    +KV  AA  +GY A   AR L    S+++
Sbjct: 11  TMKDVADQAGVSTATVSRALTNPEKVSATTRQKVEQAALAVGYSAQNLARNLKRHESRTI 70

Query: 73  VVLIPSLSNQLFIDTLEAIHEVMRPRGLEVLIGNYHYDLAEEENLIRNYLAYQPCGILLT 132
           + L+P + +  F + L  I E    RG  VLIG+  +    E+  +      Q  GILL 
Sbjct: 71  LALVPDICDPFFTEMLRGIEETAAERGYLVLIGDCAHQRKTEKTFLDLITTRQIDGILLL 130

Query: 133 G----FERSDAARQMLVASGVPCVHMMELNGEPGALSVGFSQHQAGRAAARHLIERGRKR 188
           G    F+     R+ L     P V   E   E    +V      A   A  +L + G +R
Sbjct: 131 GSQLPFDAGKDERRHLP----PMVMANEFAPELDMPTVHIDNLTAAFEAVSYLNQLGHRR 186

Query: 189 LAFIAA-QLDPRVMQRAEGFRQALAEAGLQAAELEVLAPEPSSIALGSVLFSQLMQQAPD 247
           +A IA  +  P    R +G+ QAL   GL   + + +     S   GS    +LM     
Sbjct: 187 IACIAGPEQIPISEYRLQGYIQALRRCGL-VIDNQYIVRGDFSYDTGSRGLMRLMSHPTP 245

Query: 248 VDGIFFCNDDLAQGAVLQALRQGVEVPRQVAMVGFNDLPASAHMVPRLTSIRTPRAAVGR 307
              +F   D +A GA+ QA + G++VPR +++VGF+D+  ++H  P LT++  PR  +GR
Sbjct: 246 PTAVFCHCDVMALGALTQARKMGLDVPRDLSLVGFDDIAQASHCFPALTTVSQPRYDIGR 305

Query: 308 GAAQALLALLDGKRVTNAQQDLGFELMVREST 339
            A   LLA L   +V    + +  +L++R+ST
Sbjct: 306 EAMLLLLAQLQQHKVQRGSRLISSQLIIRDST 337