Pairwise Alignments
Query, 157 a.a., putative Curli fiber surface-exposed nucleator CsgB from Pseudomonas putida KT2440
Subject, 481 a.a., minor curlin subunit CsgB, nucleation component of curlin monomers from Pseudomonas putida KT2440
Score = 53.5 bits (127), Expect = 5e-12
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 47 GAGQAAVIEQQGLGNRAALDQNGQ-ALLGRIVQSGGAQEAYILQE-GSDLMAIISQQGNG 104
G G I Q G GN + Q+ Q +VQ+G + E YI Q G +SQQGN
Sbjct: 205 GTGGTIAIGQYGGGNSVEVWQDTQIGSQASVVQTGQSNEGYIDQSFGVSNKVSLSQQGNA 264
Query: 105 NSASIRQSGSSNNAA-IEQIGNDNSASIVQSGSGLNSSVTQAGNGQHVQITQYR 157
N++ Q ++N+ I Q GN+N Q+G LN ++ GNG + + ++
Sbjct: 265 NASWSDQFETNNSTTTITQTGNNNLHFTYQNGENLNLTINTQGNGNSITASNWK 318
Score = 52.8 bits (125), Expect = 8e-12
Identities = 44/143 (30%), Positives = 57/143 (39%), Gaps = 34/143 (23%)
Query: 47 GAGQAAVIEQQGLGNRAALDQNGQALLGRIVQSGG-----------AQEAYILQEGSDLM 95
G Q A I Q G GN L Q G L + Q+G + E Y Q G+D +
Sbjct: 327 GTNQNATINQAGNGNGVNLTQKGADQLATLTQTGKGNQMSTKQDDVSNELYFEQNGTDNI 386
Query: 96 AIISQ-----------QGNGNSASIRQS------------GSSNNAAIEQIGNDNSASIV 132
I Q QG GN+ ++ QS GS N A I+Q + N A +
Sbjct: 387 LIADQRGTDNYAYGSSQGTGNTITLDQSGYSNQSYTNQLYGSGNEATIKQTDSINVAYVT 446
Query: 133 QSGSGLNSSVTQAGNGQHVQITQ 155
Q G + V Q+G Q ITQ
Sbjct: 447 QGGQSNKAFVDQSGVAQSATITQ 469
Score = 48.5 bits (114), Expect = 1e-10
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 22/131 (16%)
Query: 47 GAGQAAVIEQQGLGNRAALDQNGQALLGRIVQSGGAQEAYILQ-------------EGSD 93
G V + +G++A++ Q GQ+ G I QS G L E ++
Sbjct: 217 GGNSVEVWQDTQIGSQASVVQTGQSNEGYIDQSFGVSNKVSLSQQGNANASWSDQFETNN 276
Query: 94 LMAIISQQGNGNSASIRQSGSSNNAAIEQIGNDNSASIV---------QSGSGLNSSVTQ 144
I+Q GN N Q+G + N I GN NS + Q G+ N+++ Q
Sbjct: 277 STTTITQTGNNNLHFTYQNGENLNLTINTQGNGNSITASNWKGAKMGGQFGTNQNATINQ 336
Query: 145 AGNGQHVQITQ 155
AGNG V +TQ
Sbjct: 337 AGNGNGVNLTQ 347
Score = 46.6 bits (109), Expect = 6e-10
Identities = 37/148 (25%), Positives = 54/148 (36%), Gaps = 9/148 (6%)
Query: 17 ACWAEDLMDNADLAPGNDLGEPVIIRLLPAGAGQAAVIEQQGLGNRAALDQNGQALLG-- 74
A W++ N G + G I QG GN A +G
Sbjct: 266 ASWSDQFETNNSTTTITQTGNNNLHFTYQNGENLNLTINTQGNGNSITASNWKGAKMGGQ 325
Query: 75 -------RIVQSGGAQEAYILQEGSDLMAIISQQGNGNSASIRQSGSSNNAAIEQIGNDN 127
I Q+G + Q+G+D +A ++Q G GN S +Q SN EQ G DN
Sbjct: 326 FGTNQNATINQAGNGNGVNLTQKGADQLATLTQTGKGNQMSTKQDDVSNELYFEQNGTDN 385
Query: 128 SASIVQSGSGLNSSVTQAGNGQHVQITQ 155
Q G+ + + G G + + Q
Sbjct: 386 ILIADQRGTDNYAYGSSQGTGNTITLDQ 413
Score = 37.0 bits (84), Expect = 4e-07
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 47 GAGQAAVIEQQGLGNRAALDQNGQALLGRIVQSGGAQEAYILQEGSDLMAIISQQ 101
G+G A I+Q N A + Q GQ+ + QSG AQ A I Q GS +A ++QQ
Sbjct: 427 GSGNEATIKQTDSINVAYVTQGGQSNKAFVDQSGVAQSATITQLGSANLATVTQQ 481
Score = 35.0 bits (79), Expect = 2e-06
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 46 AGAGQAAVIEQQ--GLGNRAALDQNGQALLG------------RIVQSGGAQEAYILQ-E 90
+G A IEQ G NR+ ++Q GQ ++ Q G AY Q E
Sbjct: 145 SGQRNEAFIEQTFGGSNNRSTVNQTGQDNYATAEHLNHVDGDIQVYQEGHDNWAYGDQRE 204
Query: 91 GSDLMAIISQQGNGNSASIRQSGS-SNNAAIEQIGNDNSASIVQS-GSGLNSSVTQAGN 147
G+ I Q G GNS + Q + A++ Q G N I QS G S++Q GN
Sbjct: 205 GTGGTIAIGQYGGGNSVEVWQDTQIGSQASVVQTGQSNEGYIDQSFGVSNKVSLSQQGN 263
Score = 33.9 bits (76), Expect = 4e-06
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 50 QAAVIEQQGLGNRAALDQNGQALLGRIVQSGGAQEAYILQE-GSDLMAIISQQGNGNSAS 108
Q + Q G L +NG + G +A+ Q GS+ ++ +QQG GN ++
Sbjct: 72 QQSATGQYNAGYAEQLFENGSQITQHA--GGSYNDAFASQSLGSNNESLQTQQGVGNKST 129
Query: 109 IRQ-SGSSNNAAIEQIGNDNSASIVQSGSGLNSSVTQAGNGQ 149
+ Q S + A Q G N A I Q+ G N+ T GQ
Sbjct: 130 VWQDSQEGSKATSGQSGQRNEAFIEQTFGGSNNRSTVNQTGQ 171
Score = 33.9 bits (76), Expect = 4e-06
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 23/86 (26%)
Query: 47 GAGQAAVIEQQGLGNRAALDQNGQALLGRIVQSGGAQEAYILQEGSDLMAIISQQGNGNS 106
G+ ++ QQG+GN++ + Q+ Q EGS A Q G N
Sbjct: 112 GSNNESLQTQQGVGNKSTVWQDSQ-------------------EGSK--ATSGQSGQRNE 150
Query: 107 ASIRQS--GSSNNAAIEQIGNDNSAS 130
A I Q+ GS+N + + Q G DN A+
Sbjct: 151 AFIEQTFGGSNNRSTVNQTGQDNYAT 176
Score = 25.0 bits (53), Expect = 0.002
Identities = 38/150 (25%), Positives = 56/150 (37%), Gaps = 16/150 (10%)
Query: 6 SLLLCLALAGQACWAEDLMDNADLAPGNDLGEPVIIRLLPAGAGQAAVIEQQ-GLG-NRA 63
S + LALAGQA A+ N I + A A+ + Q G+G N
Sbjct: 8 SAAIVLALAGQAMAADSTSSQTQDGKEN------IAEVSQTQASFASATQNQTGMGHNHL 61
Query: 64 ALDQNGQALLGRIV--QSGGAQEAYILQEGSDLMAIISQQGNG--NSASIRQSGSSNNAA 119
A+ + + + Q + + GS I+Q G N A QS SNN +
Sbjct: 62 AVQAESTSDIQQSATGQYNAGYAEQLFENGSQ----ITQHAGGSYNDAFASQSLGSNNES 117
Query: 120 IEQIGNDNSASIVQSGSGLNSSVTQAGNGQ 149
++ + S V S S T +GQ
Sbjct: 118 LQTQQGVGNKSTVWQDSQEGSKATSGQSGQ 147