Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  234 bits (598), Expect = 3e-66
 Identities = 150/433 (34%), Positives = 228/433 (52%), Gaps = 30/433 (6%)

Query: 8   ASLVLSALYCACQTAQAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQ 67
           A+ ++   + A  T    F+     ++  RN+Y +RD        S+  EW QGF+   +
Sbjct: 15  AATIVPLAHAADSTPADGFVEGAHLNINTRNYYMNRDRRDIHTDDSK--EWGQGFLGIFE 72

Query: 68  SGYTDGVVGFGLDAAGMLGLKLDSSPDRSGSGLLPRGS-DKRAADDYAKAVATFKARLAQ 126
           SGYT G VGFGLDA  MLGLKLD      GS +LP GS + +A   ++ A  T K R   
Sbjct: 73  SGYTQGTVGFGLDAHAMLGLKLDGGGGTDGSSILPYGSGNGKAPGSFSTAGGTLKMRAFD 132

Query: 127 SELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYED 186
           +ELKAG L    P++A  ++R+ PQ F GV L +  LD + F   Q   TKL + + +  
Sbjct: 133 TELKAGDLFLNNPVIAGGATRMLPQTFRGVSLTNHSLDGWMFEGGQASFTKLYNQSGHRR 192

Query: 187 LTAMAQQGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKF------ 240
           +      GA      S  + +AGV +  ++ LT +L+ + L+D++ + +    +      
Sbjct: 193 IG--TSYGALPEHTDSQHMNWAGVSFSGIDGLTSNLYAAELKDVWNQYYYDLDYTYVVNE 250

Query: 241 KTRLGPGDVFTEWRWFNAREQGRALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAY 300
              L PG       +++ ++ G++LLG +DN T S +F   V  H+ +  YQ+V G+T +
Sbjct: 251 MISLNPG-----LHYYHTQDTGQSLLGDIDNNTYSLHFTVDVGHHSVTAAYQRVNGNTPF 305

Query: 301 AYVG-GTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKG----DQV 355
            Y+  G   YL + QQ S F   NER+W L+Y YNF  +G+PGLT  V Y+ G     +V
Sbjct: 306 DYIAQGDSVYLDNSQQYSDFNGPNERSWKLKYAYNFGGLGLPGLTSAVSYISGKTDLTKV 365

Query: 356 DPQRIASVKGRALAAGDG-EGREWERTTDITYVVQSGALRNVSLRWRNASMRSNFADAA- 413
           DPQ   S    A  + DG + + WER  D+ YVVQ G  +++++R + A+ R +   +A 
Sbjct: 366 DPQ---SRGYSAWYSADGKDAKHWERDIDLKYVVQGGKAKDLAVRLQWATNRGSNGYSAV 422

Query: 414 ----DENRVIVGY 422
               DE RVIV Y
Sbjct: 423 DRDVDEYRVIVDY 435