Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 454 a.a., porin from Pseudomonas simiae WCS417

 Score =  276 bits (707), Expect = 7e-79
 Identities = 160/441 (36%), Positives = 234/441 (53%), Gaps = 41/441 (9%)

Query: 18  ACQTAQAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGF 77
           A Q   A F+ D   +L LRNFY + D    +   ++  EW QGF LR  SGYT G VGF
Sbjct: 16  AQQAGAAGFVEDSKATLGLRNFYINTDNRNGTGA-NKNEEWGQGFDLRFISGYTQGTVGF 74

Query: 78  GLDAAGMLGLKLDS-------------SPDRSGSGLLPRGSDKRAADDYAKAVATFKARL 124
           G+DA G+LG++LDS             +P   G  + P   + +A +DY+    T KA++
Sbjct: 75  GVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGKAVNDYSSLGLTAKAKI 134

Query: 125 AQSELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDY 184
           +Q+ELK G L P+LP++ +N  RL PQ F G Q+ + D+   T    Q++  K R+S+  
Sbjct: 135 SQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTLVGGQIEKAKGRNSSSN 194

Query: 185 EDLTAMAQQGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRL 244
           E+L+        +    S++  YAG DY+   +LT   +   LED +++ F G      +
Sbjct: 195 ENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLTAQYYYGNLEDFYKQHFLGLTHNWAI 254

Query: 245 GPGDVFTEWRWFNAREQG-----------------RALLGGVDNQTLSTNFGYSVQGHTF 287
           GPG + ++ R+FN+ + G                 RA  G VDN   S  F Y+V GHTF
Sbjct: 255 GPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVDNNLYSGLFLYTVAGHTF 314

Query: 288 SGGYQKVRGDTAYAYVG---GTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLT 344
            GGYQ   G + + ++    G+  YL ++ Q+  FA A ER W  RY Y+FA VG+PGLT
Sbjct: 315 GGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTWQARYAYDFAKVGVPGLT 374

Query: 345 FNVRYVKGDQVDPQRIASVKGRALAAGDGEGREWERTTDITYVVQSGALRNVSLRWRNAS 404
             V Y+KG  +D   +A+   R    G     EWER   + YV+  G L+N+ + W+NA 
Sbjct: 375 AGVVYLKGSDID--TVANTASRTQFNGQS---EWERDITVAYVIPEGPLKNLGVAWKNAM 429

Query: 405 MRSNFADA--ADENRVIVGYT 423
            R++ A A   DENR+IV Y+
Sbjct: 430 WRTDIAGARDQDENRLIVSYS 450