Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 432 a.a., porin from Pseudomonas simiae WCS417

 Score =  200 bits (508), Expect = 8e-56
 Identities = 135/429 (31%), Positives = 202/429 (47%), Gaps = 49/429 (11%)

Query: 18  ACQTAQAAFIHDGSGSLELRNFYFDRDFHGDSA---TQSRRGEWAQGFMLRLQSGYTDGV 74
           + Q+    F+ D + S+  R  YF RDF  + +   +QSR  E   GF    QSG+T G 
Sbjct: 24  SAQSDSKGFVEDSTFSINTRALYFSRDFRNNPSGPGSQSRAEETGLGFNALYQSGFTQGT 83

Query: 75  VGFGLDAAGMLGLKLDSSPDRSGSGLLPRGSDKRAADDYAKAVATFKARLAQSELKAGGL 134
           +G G+D  G+LG+KLDS   R+G+GL P GSD R+ DDY+K     K R++ + LK G  
Sbjct: 84  IGVGVDVIGLLGVKLDSGKGRAGTGLFPTGSDGRSQDDYSKGGGAVKFRISDTVLKVGDQ 143

Query: 135 SPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQG 194
               P+ AS+ SRL P+   G+ + S           ++   KL         +++AQ  
Sbjct: 144 YTTAPVFASDDSRLLPELPQGISITSN----------EIKGLKLEGG---HFTSSVAQNQ 190

Query: 195 AYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRLGPGDVFT-EW 253
            Y  ++   +  + G  Y      T SL+ +  ED FR+ ++   +   L     F  ++
Sbjct: 191 TYHDSLGLTKTDFVGGVYSFTPEFTGSLYYAKTEDYFRKYYSNLNWTHALSDDQSFALDF 250

Query: 254 RWFNAREQGRALLGG-------------VDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAY 300
             ++ +  G  L                +DN+  S    Y++  HTF+   QKV GD  Y
Sbjct: 251 NIYDTKSDGEGLQRAYKDNGLPFAERTKLDNRAFSLQGAYTIGAHTFTLAAQKVTGDGDY 310

Query: 301 AY--VGGTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQ 358
            Y   GG   +L +    S F    E+++  RYD N A  GIPGL+F  RYV G      
Sbjct: 311 GYGVDGGGTVFLANSIARSDFNAEGEKSYQARYDINMATFGIPGLSFMTRYVTG------ 364

Query: 359 RIASVKGRALAAGDGEGREWERTTDITYVVQSGALRNVSLRWRNASMRSN-----FADAA 413
                   A  A    G+EWER  +  YV+QSG  +++SLR R A+ RS+      + + 
Sbjct: 365 ------SGANTATTSNGKEWERDIEAKYVIQSGPAKDLSLRIRQATYRSSDGVYYGSSSI 418

Query: 414 DENRVIVGY 422
           DE R+I  Y
Sbjct: 419 DELRLIANY 427