Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  187 bits (475), Expect = 5e-52
 Identities = 133/425 (31%), Positives = 200/425 (47%), Gaps = 35/425 (8%)

Query: 20  QTAQAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGFGL 79
           Q     FI   S +  LRN+Y +R+  G  A      +W QG ML   SG+T G +GFG+
Sbjct: 28  QADSKGFIEGSSVTGLLRNYYMNRNREGGRADNI---DWTQGAMLNYASGFTQGTIGFGV 84

Query: 80  DAAGMLGLKLDSSPDRSGSGLLPRGSDKRAADDYAKAVATFKARLAQSELKAGGLSPQLP 139
           DA    GLKLD++   +G+G LP        D Y    A  K ++++++LK G + P  P
Sbjct: 85  DAYAYGGLKLDATHADAGTGNLPTDRHGDPEDAYGSVGAAVKIKVSKTQLKFGDMQPTAP 144

Query: 140 LLASNSSRLFPQWFNGVQLVSK-----DLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQG 194
           + A+  +RL PQ   G  L S      DL+   FT      T   D   Y          
Sbjct: 145 VFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTNSGMTSNHDHDIY---------- 194

Query: 195 AYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRL-GPGDVFTEW 253
           A  A + ++   + G  Y    +L+ +++   LED++R+ +    +   L     +  + 
Sbjct: 195 ATYANIAANSASFLGGKYTFSPSLSATVYAGELEDIWRQYYTNLNYVIPLVHDQSLALDG 254

Query: 254 RWFNAREQGRALLGGVDNQTLSTNFGYS-VQGHTFSGGYQKVRGDTAYAYV--------- 303
             +   + G A  G ++N T S    YS +Q HT +  +QKV GDT + Y+         
Sbjct: 255 NLYRTLDTGSAKAGAINNTTYSLAAAYSFLQAHTLTLSFQKVHGDTPFDYIGTGNNGAGE 314

Query: 304 GGTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIASV 363
           GG   YL +  Q   F    E++W +RYD N A+ G+PGL+F  RY+ G  ++       
Sbjct: 315 GGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGRYINGSDINGTHTPDH 374

Query: 364 KGRALAAGDGEGREWERTTDITYVVQSGALRNVSLRWRNASMRSNFADAAD----ENRVI 419
              A   GD +G   E   +  YV+QSG  +N+SLR R+A + +N AD  D    E R+I
Sbjct: 375 SAYAGDYGD-DGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAAN-ADQRDGDLNELRLI 432

Query: 420 VGYTF 424
           V Y F
Sbjct: 433 VDYPF 437