Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 416 a.a., porin from Pseudomonas simiae WCS417

 Score =  250 bits (639), Expect = 5e-71
 Identities = 142/400 (35%), Positives = 220/400 (55%), Gaps = 20/400 (5%)

Query: 26  FIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGFGLDAAGML 85
           F+ D S +L LRNF+F+R++   +  Q    EW Q F+L  +SG+T G VGFG+D  G+ 
Sbjct: 29  FLEDASANLNLRNFFFNRNYTNPTKAQGGAQEWTQSFILDAKSGFTQGTVGFGVDVLGLY 88

Query: 86  GLKLDSSPDRSGSGLLPRGSDKRAADDYAKAVATFKARLAQSELKAGGLSPQLPLLASNS 145
            LKLD      G+ LLP   D R AD++ +    FKAR++++E+K G   P LP+L S+ 
Sbjct: 89  SLKLDGGRGTGGTQLLPLDHDGRPADEFGRLGVAFKARISKTEVKVGEWMPVLPILRSDD 148

Query: 146 SRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQGAYSATVTSDRL 205
            R  PQ   G Q+ SK++D  T    Q  A   RD +   DL+   +        TSDR 
Sbjct: 149 GRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRDDSSMNDLSMFGK-----TAFTSDRF 203

Query: 206 RYAGVDYQPLNNLT-LSLHTSVLEDLFRRDFAGFKFKTRLGPGDVFTEWRWFNAREQGRA 264
            + G +Y   +  T + L  + L+D++ + F        LG   +     +F  ++ G A
Sbjct: 204 NFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHSQPLGNWTLGANLGFFYGKDDGSA 263

Query: 265 LLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYAYVGGTD-TYLFSEQQVSTFALAN 323
             G +DN+T S  F     G+TF  G QK+ G++A+  V GT    L ++   +++  A 
Sbjct: 264 RAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSAWMRVNGTSGGTLANDSYNASYDNAQ 323

Query: 324 ERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIASVKGRALAAGDGEGREWERTTD 383
           E++W +R+DYNFAA+G+PGLT   RY+ G  V    +             +G+EW R ++
Sbjct: 324 EKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTGTVT------------DGKEWGRESE 371

Query: 384 ITYVVQSGALRNVSLRWRNASMRSNFA-DAADENRVIVGY 422
           + Y VQSG+L+N+++R RN+SMR +++ +  DENR+IV Y
Sbjct: 372 LGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDENRLIVSY 411