Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  289 bits (739), Expect = 1e-82
 Identities = 168/428 (39%), Positives = 239/428 (55%), Gaps = 21/428 (4%)

Query: 6   RRASLVLSALYCACQTAQ-AAFIHDGSGSLELRNFYFDRDFHG--DSATQSRRGEWAQGF 62
           R A   ++A  CA  TA+ A FI     +L+ RN++F RD+     ++TQSR  EWAQGF
Sbjct: 14  RLAGGCIAAALCAEATAEEAGFIEGARATLQARNYFFSRDYADIKGASTQSRTQEWAQGF 73

Query: 63  MLRLQSGYTDGVVGFGLDAAGMLGLKLDSSPDRSGSGLLPRGSDKRAADDYAKAVATFKA 122
           +L   SGYT G +G G+D  G+LG KLDSSP+ + SGLLP     ++AD+Y++  A  K 
Sbjct: 74  ILNASSGYTQGTLGVGVDVTGLLGFKLDSSPEHARSGLLPSLDSGKSADEYSRLGAAIKF 133

Query: 123 RLAQSELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDST 182
           +++Q+ELK G L P LP+L  +  RL P  + G  L S++    T +  Q  +T LRDS+
Sbjct: 134 KVSQTELKVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFRSTSLRDSS 193

Query: 183 DYEDLTAMAQ---QGAYSATVTSDRLRYAGVDYQPLNNLT-LSLHTSVLEDLFRRDFAGF 238
           + + + A+       A  A  TSDR  Y G DY   +N T + +  + LED++++ F  F
Sbjct: 194 NSQKMYALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDIYQQRFYSF 253

Query: 239 KFKTRLGPGDVFTEWRWFNAREQGRALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDT 298
           K    LG   +     +F+ARE G  + G  DN  L + F     GHTF  GYQ++ GD 
Sbjct: 254 KHAEPLGSWTLGVNAGYFDAREDGSKVAGDYDNHALFSLFSAKTGGHTFYVGYQQIGGDD 313

Query: 299 AYAYVGGTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQ 358
            +  VG     + +      F+   ER+W +R+DYNF A+G+PGLT  +RYVKG  V+  
Sbjct: 314 GFIQVGANTNPMGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLTSTLRYVKGRDVE-- 371

Query: 359 RIASVKGRALAAGDG-EGREWERTTDITYVVQSGALRNVSLRWRNASMRSNFADAADENR 417
                       G G EGR+ ER  D+ YVVQSG L  + +R RN   RSN+    DENR
Sbjct: 372 -----------TGLGFEGRDRERDLDLAYVVQSGPLAGLGIRVRNVMARSNYRTDIDENR 420

Query: 418 VIVGYTFE 425
           +I+ YT +
Sbjct: 421 LILSYTIK 428