Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  209 bits (531), Expect = 2e-58
 Identities = 142/423 (33%), Positives = 213/423 (50%), Gaps = 22/423 (5%)

Query: 18  ACQTAQAAFIHDGSGSLELRNFYFDRDFHGDSAT------QSRRG---EWAQGFMLRLQS 68
           A + +   F+   + S+  RNFYF+RD     A       Q+  G    W    + R +S
Sbjct: 24  AAEKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPTHNPSKQADNGYSEAWGHAVITRFES 83

Query: 69  GYTDGVVGFGLDAAGMLGLKLDSSPDRSGS----GLLPRGSDKRAADDYAKAVATFKARL 124
           G+T G VG GLDA  MLGLKLD+   R+G      +LP   D +A D+Y K     K RL
Sbjct: 84  GFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVLPVDRDGQARDEYTKVGGAAKLRL 143

Query: 125 AQSELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDY 184
             + LK G + P  P++A+  SRL P+ F GV L +  +   T    ++ A     S+D 
Sbjct: 144 FDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENSSIKDLTLQAGRLHAMSQPMSSDL 203

Query: 185 EDLTAMAQQGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRL 244
            +         Y   V S  + Y G DY+   ++++SL +S L+D + + +AG      L
Sbjct: 204 RENFVTF----YGGPVDSPWIAYGGGDYRLNEHVSVSLFSSRLKDAWNQYYAGTSLSWPL 259

Query: 245 GPG-DVFTEWRWFNAREQGRALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYAYV 303
                +   + ++ A ++G+  LG  DN   S   G     HT +  +Q+  GD  + Y+
Sbjct: 260 SEALALIGGFNYYKAVDEGQQRLGAFDNDIWSAKLGVRFGAHTLALTHQRNNGDDDFDYL 319

Query: 304 GGTDT-YLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIAS 362
             +D+ +L +  Q S F    ER+WMLRYD N AA G+PGL+F  RY KG+  D     +
Sbjct: 320 RQSDSIFLDNSIQYSDFNAPKERSWMLRYDLNMAAYGVPGLSFMTRYGKGNDADYSNANA 379

Query: 363 VKGRALAAGD--GEGREWERTTDITYVVQSGALRNVSLRWRNASMRSN-FADAADENRVI 419
              R   AG+   + + WER  ++ YVVQ+GA +++SLR R A+ R+  F    DE R+I
Sbjct: 380 TYMRRDVAGNPLTDQKRWERDIEVKYVVQTGAAKDLSLRVRQATTRATAFESDLDEVRMI 439

Query: 420 VGY 422
           V Y
Sbjct: 440 VEY 442