Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 449 a.a., putative OprD family outer membrane porin from Pseudomonas putida KT2440

 Score =  209 bits (533), Expect = 1e-58
 Identities = 142/417 (34%), Positives = 204/417 (48%), Gaps = 39/417 (9%)

Query: 37  RNFYFDRDFHGDSAT--------QSRRGEWAQGFMLRLQSGYTDGVVGFGLDAAGMLGLK 88
           RNF+F +D+     T        QS   EW  G +  LQSG+T G VGFG+D  G++GLK
Sbjct: 41  RNFFFSQDYRNGDFTLNPNNGERQSLHREWGHGIIANLQSGFTRGTVGFGVDVQGLVGLK 100

Query: 89  LDSSPDRSGSGLLPRGSDKRAA--------DDYAKAVATFKARLAQSELKAGGLSPQLPL 140
           LD      G+G+   G   R+         D Y K     K R   +EL+ G +SP  P+
Sbjct: 101 LDGGNGAVGNGVGVPGIVSRSGSNFDGEPKDSYGKVGTALKVRAFDTELRYGDVSPTSPV 160

Query: 141 LASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQGAYSATV 200
           L ++  RL PQ   G    +  LD      L +   KL  S+D          G    TV
Sbjct: 161 LHASDIRLLPQTLRGFIFNNNSLDG-----LSLQGGKLESSSDRNASNHRGDLG----TV 211

Query: 201 TSDRLR------YAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRLGPG-DVFTEW 253
            + R++      Y G DY+  + LTL LH+S L+D++ + F        LG    + T  
Sbjct: 212 YAGRIKGANDVVYLGGDYRFNDQLTLRLHSSRLDDVWNQSFFSVDHVQPLGSELSLKTGL 271

Query: 254 RWFNAREQGRALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYAYVGGT-DTYLFS 312
            ++  R+ G+AL G +DN + S + G +   H F   Y ++ GDT + YV  T D  L +
Sbjct: 272 NYYRTRDSGQALAGQIDNDSWSVHAGLAAGAHGFKLSYTRIDGDTPFDYVWNTYDLQLDA 331

Query: 313 EQQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIASVKGRALAAGD 372
             QVS F   NERAW  RYDY+FA +G+PGL+   RYV+G  +D  R       +   G 
Sbjct: 332 ASQVSDFNNPNERAWEARYDYDFAPLGVPGLSLTARYVRGTDIDGTRAGG--AYSYFNGT 389

Query: 373 GEGREWERTTDITYVVQSGALRNVSLRWRNASMR---SNFADA-ADENRVIVGYTFE 425
            +GR WER   + YV+QSG  +++S     A+ R    + A++  DE R+IV Y  +
Sbjct: 390 EDGRHWERNLWLKYVLQSGPAKDLSFNLMQATHRVGGDHVAESNVDELRLIVQYPLD 446