Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  216 bits (549), Expect = 1e-60
 Identities = 140/417 (33%), Positives = 211/417 (50%), Gaps = 29/417 (6%)

Query: 26  FIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGFGLDAAGML 85
           FI   S +L  RN YF+RD H      +R  EW QG + R +SGYT GVVGFGLDA  ML
Sbjct: 32  FIEGSSFNLHFRNAYFNRDNHNAGVRDTR--EWGQGAVARFESGYTPGVVGFGLDAHAML 89

Query: 86  GLKLDSSPDRSGSGLLPR-----GSDKRAADDYAKAVATFKARLAQSELKAGGLSPQLPL 140
           GLKLD     +G+ +LP      G    A   ++ A A  K +   +ELKAG L    P+
Sbjct: 90  GLKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGAAVKLKAFDTELKAGDLFLTNPV 149

Query: 141 LASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQGAYSATV 200
           +A   +R+ PQ F GV L +  +D       QV  T   + + +  +      G+     
Sbjct: 150 IAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHPYNQSGHRRID--TYYGSLDEHD 207

Query: 201 TSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFK------TRLGPGDVFTEWR 254
            S  L +AG  +    ++T +L+ + L+D++ + +A F +         L PG  F    
Sbjct: 208 KSKHLNWAGASWSGTEHITANLYAAELKDIWNQYYADFDYTYVVNDLVSLNPGVHF---- 263

Query: 255 WFNAREQGRALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYAYVG-GTDTYLFSE 313
            ++ ++ G+ALLG +DN T S +F  +   H+ +  YQ+V G+T + Y+  G   YL + 
Sbjct: 264 -YHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGNTPFDYINLGDSVYLDNS 322

Query: 314 QQVSTFALANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIASVKGRALAAGDG 373
           +  S F   NER+W L+Y Y+FA VG+PGL+ ++ Y +G+    +             DG
Sbjct: 323 RMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADLTKATQDTTHYDYYREDG 382

Query: 374 E-GREWERTTDITYVVQSGALRNVSLRWRNASMRSNFADAA-------DENRVIVGY 422
           +    WER  D+ YV Q G L+++S+  R A+ R +   A+       DE RVIV Y
Sbjct: 383 KNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASIDSNSDNDELRVIVDY 439