Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  207 bits (527), Expect = 5e-58
 Identities = 144/449 (32%), Positives = 213/449 (47%), Gaps = 61/449 (13%)

Query: 18  ACQTAQAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGF 77
           A Q   A F+ D   SL  R  YF+ D       Q   G   QGF L   SG+T G VGF
Sbjct: 16  AQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGIDQKESG---QGFKLDYLSGFTQGTVGF 72

Query: 78  GLDAAGMLGLKLD----SSPDRSGSGLLPRGSDKRAADDYAKAVATFKARLAQSELKAGG 133
           G+D   + G+ LD    S PD + +   P  SD  A  D+A+     KAR +++E+  G 
Sbjct: 73  GVDVQALWGIHLDGGRGSRPDANNT-FFPSDSDGSAVHDWARIGGNAKARFSKTEVHYGS 131

Query: 134 -LSPQLPLLASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQ 192
            L+P LP+L SN  RL PQ F G  L SK++D  T    Q+     R S++    T ++ 
Sbjct: 132 ALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGRASSNR---TGLSV 188

Query: 193 QGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRLGPGDVF-T 251
            GA+     S++ ++AG DY+   +LTL  + S LED +++ F G     ++     F T
Sbjct: 189 SGAFR---DSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHFLGATHVFKIADNQSFKT 245

Query: 252 EWRWFNAREQGR---------------ALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRG 296
           + R+F++   G+                  G VDN+T S  F Y++ GH    G+Q+V  
Sbjct: 246 DLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLGGHALMLGHQQVGD 305

Query: 297 DTAYAYV-----------------GGTDTYLFSEQQVSTFALANERAWMLRYDYNFAAVG 339
           D  + ++                 GG   YLF++  ++ FA A E     +Y Y+FAA+G
Sbjct: 306 DGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENTTFGQYSYDFAALG 365

Query: 340 IPGLTFNVRYVKGDQVDPQRIASVKGRALAAGDGEGREWERTTDITYVVQSGALRNVSLR 399
           +PGL  +V Y++GD V  +           +GDG   EWER   + Y +Q G L+ +   
Sbjct: 366 VPGLKASVSYLRGDDVRNR-----------SGDGTYNEWERDARVDYTLQEGTLKGLGFS 414

Query: 400 WRNASMRSNFADA--ADENRVIVGYTFEF 426
            R    R +   A   D+ R IV YT+ F
Sbjct: 415 LRQGVYRGSGESALDKDQTRFIVNYTYNF 443