Pairwise Alignments

Query, 426 a.a., putative Porin from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  206 bits (523), Expect = 2e-57
 Identities = 140/442 (31%), Positives = 213/442 (48%), Gaps = 25/442 (5%)

Query: 2   IVIFRRASLVLSALYCACQTAQ---AAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGE- 57
           + ++  A   LS  Y     A+     FI   S ++  RNFYF+RD    +A     G+ 
Sbjct: 5   VPLYLAAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKG 64

Query: 58  --------WAQGFMLRLQSGYTDGVVGFGLDAAGMLGLKLDSSPDRSGS----GLLPRGS 105
                   WA   + +  SG+T G VGFG+DA  M+GLKLD+   R+G      +LP  +
Sbjct: 65  NTNGYSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDN 124

Query: 106 DKRAADDYAKAVATFKARLAQSELKAGGLSPQLPLLASNSSRLFPQWFNGVQLVSKDLDR 165
              A D+Y K     K RL  + +K G + P  P++AS  SRL P+ F GV + +  +  
Sbjct: 125 KGEARDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQG 184

Query: 166 FTFTLLQVDATKLRDSTDYEDLTAMAQQGAYSATVTSDRLRYAGVDYQPLNNLTLSLHTS 225
            T    ++ A     S++  D         Y   V S  + Y G DY   +N T+S++ S
Sbjct: 185 LTLQGGRLHAMSQPVSSNLNDNFVTF----YGGPVNSPWIGYGGGDYSINDNWTVSVYAS 240

Query: 226 VLEDLFRRDFAGFKFKTRLGPG-DVFTEWRWFNAREQGRALLGGVDNQTLSTNFGYSVQG 284
            L+D++ + +AG      L     +   + ++ A ++G+  LG  DN   S   G     
Sbjct: 241 QLKDVWNQYYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGA 300

Query: 285 HTFSGGYQKVRGDTAYAYVGGTDT-YLFSEQQVSTFALANERAWMLRYDYNFAAVGIPGL 343
           HT +  +Q+  GD  + Y+  +D+ ++ +  Q S F    ER+WMLRYD NF + GIPGL
Sbjct: 301 HTLALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGL 360

Query: 344 TFNVRYVKGDQVDPQRIASVKGRALAAGD--GEGREWERTTDITYVVQSGALRNVSLRWR 401
           TF  RY +G   D         R    G+     + WER  ++ YVVQ+G  +++S R R
Sbjct: 361 TFMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLR 420

Query: 402 NASMRSN-FADAADENRVIVGY 422
            A+ R+  F    DE RVI+ Y
Sbjct: 421 QATTRATAFESDLDETRVIIEY 442