Pairwise Alignments

Query, 725 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 646 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

 Score =  333 bits (855), Expect = 1e-95
 Identities = 199/611 (32%), Positives = 315/611 (51%), Gaps = 30/611 (4%)

Query: 29  EAISSPFRLQLELVSFEDDVDFAQLLDKPVLFTLWQGERPLRYVHGLVSTFSQGETGFDR 88
           E +   F  +L+L S + ++D  QLL KP+   L   +   R+ HG+V+  SQ       
Sbjct: 30  EELGRLFNYELQLTSLDANIDLNQLLGKPMSVGLQLADGGERHFHGIVARCSQNIDQGQF 89

Query: 89  TRYRALVEPVLARAGLRSNWRIFQQKTVPQILEIMLKRQGVNAYELKCLDPHQVREFCVQ 148
             Y+  + P L      S+ RIFQ  ++PQI++ + +  G + +E     P++  E+CVQ
Sbjct: 90  ASYQVTLRPWLWLLSRTSDCRIFQNLSIPQIIKQVFRDLGFSDFEDALSRPYREWEYCVQ 149

Query: 149 AGETDLDFMARLAAEEGIVYRFDHTPKQHLLIITDRLLALGQISRGAIKTDDEDEGFHND 208
             ET  DF++RL  +EGI Y F H   +H+L++ D                    G H  
Sbjct: 150 YRETSFDFVSRLMEQEGIYYFFRHEQDRHVLVLADAY------------------GAHTT 191

Query: 209 DVGPDQVLYRSVGGGDQARPCLRRLRYSEQVRTARQVQRDYTFTHPQYRQEHQAYDNSNT 268
             G   + Y       + R  +     + +V+       DY F  P    + ++      
Sbjct: 192 VPGYASIPYYPKDEQQRERDHMHNWHLAHEVQPGSMELNDYDFQRPSASIDVRSA-MPRP 250

Query: 269 HQSLNYERFDYPGRYKRDAVGVPFTATRLTALRHDARIAEVEGDDVRLQPGLSFTLIEHP 328
           H + +Y  +DYPG Y +   G  +  TR+ AL+      E  G+   L  G  F+L    
Sbjct: 251 HTAGDYPLYDYPGTYVQSEDGEHYARTRIEALQTLHEQIEFNGNARGLGSGHLFSLTGFS 310

Query: 329 REDLNVHWRTVSVHHEGTQFTSLQE--EAADSQQGTRYKQEALLVPGRTEWRP-APLPKP 385
           R+D N  +  V     G ++  +QE  E+       +++     +  +  +RP A   +P
Sbjct: 311 RQDQNREYLIV-----GCRYYIVQESLESGGGSGSAQFESSLTCIDAQQSFRPLANTHRP 365

Query: 386 RIDGPHMATVVGPKGEEIYCDQWGRVKVSFPWDRESENNEFSSCWVRVSQGWAGGSWGSM 445
            + GP  A VVGPKGEEI+ DQ+GRVKV F WDR  ++NE SSCW+RVSQ WAG +WGSM
Sbjct: 366 IVKGPQTALVVGPKGEEIWTDQYGRVKVHFYWDRHDQSNENSSCWIRVSQSWAGKNWGSM 425

Query: 446 AIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLPPYDLPEHKTRMTIKSQTHKG---EGF 502
            IPRIGQ+VI+ ++  DPD+P+ITGR Y   Q  PYDLPE+ T+  +KS++ KG     F
Sbjct: 426 QIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYDLPENATQSGMKSRSSKGGSPANF 485

Query: 503 NELRFEDELGRQEVFIHAERDQNNIVKHDETTRVGNDRTERVERDETISIGQDRREDIAR 562
           NE+R ED+ G ++++IHAER+Q+ +V+ DE+  VG+DR + +  +ET++IG +R   + +
Sbjct: 486 NEIRMEDKKGLEQLYIHAERNQDIVVEVDESHSVGHDRNKSIGHNETVTIGNNRLRIVKQ 545

Query: 563 DESVGIGQNRVHEIGNDDSLSIGRNHRITTGKDRIEQVGNHRQDITKANHTVEIGGHREQ 622
           ++ + +GQ +   I     + +G N R+  G+  +E   + + ++T    +    G  E 
Sbjct: 546 EDILSVGQKKTDSISQSYVIEVGENLRLVCGESILELNASGQINLTGVQISFYASGDAEF 605

Query: 623 VVAGHSTLQTG 633
              G   L  G
Sbjct: 606 NTGGVLHLNNG 616