Pairwise Alignments

Query, 725 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 839 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  227 bits (579), Expect = 2e-63
 Identities = 155/529 (29%), Positives = 246/529 (46%), Gaps = 47/529 (8%)

Query: 11  FQPLVGRSEFEVVSFELDEAISSPFRLQLELVSFEDDVDFAQLLDKPVLFTLWQGERPLR 70
           F  LVGR           EA+S      +EL+   + +D   LL K    ++  G    R
Sbjct: 7   FHRLVGR-----------EALSQANAFDVELLGNSNTIDAKALLGKAATVSMQTGHGGTR 55

Query: 71  YVHGLVSTFSQGETGFDRTRYRALVEPVLARAGLRSNWRIFQQKTVPQILEIMLKRQGVN 130
           ++ G+V+ F           Y   + P    A  R ++RIFQ + VP+I+  +L+R G +
Sbjct: 56  HLAGIVTRFGLAREDARHAFYAMRLRPWFWLATKRHDYRIFQDRGVPEIVAEVLERYG-H 114

Query: 131 AYELKCLDPHQVREFCVQAGETDLDFMARLAAEEGIVYRFDHTPKQHLLIITDRLLALGQ 190
            +E K    ++   +CVQ GE+D DF++RL   EGI Y   H   QH+L+  D +     
Sbjct: 115 PFEQKLSRNYRNWTYCVQYGESDFDFVSRLCEHEGIYYYVRHEATQHVLVFADDIA---- 170

Query: 191 ISRGAIKTDDEDEGFHNDDVGPDQVLYR-----SVGGGDQARPCLRRLRYSEQVRTARQV 245
                          H+   G + V Y       + GG++    +      E++R+ R  
Sbjct: 171 -------------NSHSPLPGGETVRYHPHEQSGMTGGEEPAERIYAWETGEELRSGRYG 217

Query: 246 QRDYTFTHPQY-----RQEHQAYDNSNTHQSLNYERFDYPGRYKRDAVGVPFTATRLTAL 300
             DY F  P+      RQ    +D+ +      +E F++PG Y  ++ G  +  TR   L
Sbjct: 218 SDDYDFEKPKADLKSRRQMPPGHDHDD------HEVFEWPGHYLLNSDGDAYAQTRNEEL 271

Query: 301 RHDARIAEVEGDDVRLQPGLSFTLIEHPREDLNVHWRTVSVHHEGTQFTSLQEEAADSQQ 360
                 A    +   L PG +  L  HP E  N  +  + V +   +     E   D+  
Sbjct: 272 LSARNQAHGRSNLRSLAPGHTLRLAGHPCEAQNRQYLLLGVAYHLQENLRATEGTGDTSG 331

Query: 361 GTRYKQEALLVPGRTEWR-PAPLPKPRIDGPHMATVVGPKGEEIYCDQWGRVKVSFPWDR 419
           G+  +      P    WR P   PKPR  GP  A VVGP G EI+ DQ GR+KV F WDR
Sbjct: 332 GSIQRFAFDAQPTSMAWRAPRTTPKPRTGGPQTAVVVGPAGHEIWTDQHGRIKVRFRWDR 391

Query: 420 ESENNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLP 479
               +E +SCW+RVS GWAGG +G+ A+PRIGQ+V++ +++ DPD P++ GR +  + +P
Sbjct: 392 LGRADENASCWLRVSHGWAGGHFGTAALPRIGQEVVVDFLDGDPDHPIVVGRFHNADAMP 451

Query: 480 PYDLPEHKTRMTIKSQTHKGE-GFNELRFEDELGRQEVFIHAERDQNNI 527
            + LP      +++S+   G    N L  +D  G+ +  + ++   +++
Sbjct: 452 AWQLPRETHLTSMRSRELGGSLRGNHLVLDDSAGKVQAQLKSDHQCSSL 500