Pairwise Alignments

Query, 725 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 1057 a.a., VgrG protein from Variovorax sp. SCN45

 Score =  252 bits (644), Expect = 6e-71
 Identities = 163/511 (31%), Positives = 256/511 (50%), Gaps = 29/511 (5%)

Query: 29  EAISSPFRLQLELVSFEDDVDFAQLLDKP----VLFTLWQGERPLRYVHGLVSTFSQ-GE 83
           E IS+ F  ++ L+S   ++   ++L +     V      G    R++ G V+ F+  G+
Sbjct: 24  ERISALFEHRVRLISDMPNIQPRRMLGEDMSIEVNLATELGGAGKRFLSGQVTRFAYVGK 83

Query: 84  TGFDRTRYRALVEPVLARAGLRSNWRIFQQKTVPQILEIMLKRQGVNAYELKCLDPHQVR 143
              D   Y A + P L  A  RS+++IFQ KT PQIL+ +L   G  A + +    ++  
Sbjct: 84  DDGDMCVYEATLRPWLWYATRRSDFKIFQFKTAPQILQEVLAPYGF-AIDARLSGNYRTW 142

Query: 144 EFCVQAGETDLDFMARLAAEEGIVYRFDHTPKQHLLIITDRLLALGQISRGAIKTDDEDE 203
           ++CVQ  E+D +F++RL  +EGI Y F H    H L++ D   +   +  G +K      
Sbjct: 143 DYCVQYSESDFNFVSRLMEQEGIYYFFSHAQGSHQLVLCDGADSHTPVPSGPVKVP---- 198

Query: 204 GFHNDDVGPDQVLYRSVGGGDQARPCLRRLRYSEQVRTARQVQRDYTFTHPQYRQEHQAY 263
             ++  V   Q+L +           +    +SE + +      DY F  P    +    
Sbjct: 199 --YHAGVLAAQILEQDF---------IDSWSHSEDIASGNFAADDYDFRKPNAEIDTVRQ 247

Query: 264 DNSNTHQSLNYERFDYPGRYKRDAVGVPFTATRLTALRHDARIAEVEGDDVRLQPGLSFT 323
             +  H   ++E +D+PG Y     G  +   RL  L     +   EG+   + PG  F 
Sbjct: 248 QPAG-HSRDDFEIYDWPGGYTELGDGENYARLRLEQLAGRRELVSAEGNLRHMAPGYLFE 306

Query: 324 LIEHPREDLNVHWRTVSVHHEGTQFTSLQEEAAD-----SQQGTRYKQEALLVPGRTEWR 378
           L  HP  + N  +   +V ++  +       AAD     S   T Y+Q   ++P    +R
Sbjct: 307 LARHPNAEDNRRYLIEAVTYDFQENALRVAGAADAAYSESTSSTSYRQTFEVLPDSAPFR 366

Query: 379 PAPL-PKPRIDGPHMATVVGPKGEEIYCDQWGRVKVSFPWDRESENNEFSSCWVRVSQGW 437
           PA + P+PR  GP  A VVGP GEEI+ D++GR+KV F WDR    +E SSCW+RVSQ W
Sbjct: 367 PARVTPRPRTTGPQTAVVVGPAGEEIHTDEYGRIKVQFHWDRYGRRDENSSCWIRVSQTW 426

Query: 438 AGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLPPYDLPEHKTRMTIKSQTH 497
           AG ++G+M IPRIGQ+VI+ ++N DPD P++TG  Y   Q+PP++LP HKT+   ++   
Sbjct: 427 AGSNYGAMHIPRIGQEVIVDFLNGDPDYPIVTGCVYNAAQMPPWELPRHKTQTGFQTNWS 486

Query: 498 KGEGFNE-LRFEDELGRQEVFIHAERDQNNI 527
           KG G    LRFED  G + + +  +    ++
Sbjct: 487 KGGGGKHMLRFEDSRGTEHIELSTDHGNTHL 517