Pairwise Alignments

Query, 725 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  247 bits (631), Expect = 1e-69
 Identities = 177/629 (28%), Positives = 294/629 (46%), Gaps = 52/629 (8%)

Query: 19  EFEVVSFELDEAISSPFRLQLELVSFEDDVDFAQLLDKPVLFTLWQGERPLRYVHGLVST 78
           EF +  F   E +S  +   L L+S + DV    L+       +       R+++G V  
Sbjct: 29  EFLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSLIGSQATVEIELSNGSFRHINGYVQR 88

Query: 79  FSQGETGFDRTRYRALVEPVLARAGLRSNWRIFQQKTVPQILEIMLKRQGVNA-YELKCL 137
           FS   +     RY A++ P L     R + RIFQ+K+V  ++  +    G  A YE +  
Sbjct: 89  FSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGFGTLAKYEFRVS 148

Query: 138 DPHQVREFCVQAGETDLDFMARLAAEEGIVYRFDHTPKQHLLIITDRLLALGQISRGAIK 197
            P +   +  Q  E+D +F+ RL   EG+ Y F+HT   HL++ITD    L  +      
Sbjct: 149 KPLKSHSYITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSSTLLPLPE---- 204

Query: 198 TDDEDEGFHNDDVGPDQVLYRSVGGGDQARPCLRRLRYSEQVRTARQVQRDYTFTHPQYR 257
                           Q+ Y S    + A   + + + + Q+++ +   R + +  P+  
Sbjct: 205 --------------QPQIRYHSASVTETA-DSITQWQSTRQLQSGQIAVRTFDYRQPRNF 249

Query: 258 QEHQAYDNSNTHQSLNYERFDYPGRYKRDAV--GVPFTATRLTALRHDARIAEVEGDDVR 315
                   +       +E +D+PG+Y   +   G      R+ AL    +    E +   
Sbjct: 250 LPVTMQSLNQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGESNCRA 309

Query: 316 LQPGLSFTLIEHPREDL----NVHWRTVSVHHEGTQFTSLQEEAADSQQGTRYKQEALLV 371
           ++PG +F L +H   D     N  +  +SV H G+      ++A        Y    + V
Sbjct: 310 MKPGYTFELTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTGDQAG-------YVNRFVCV 362

Query: 372 PGRTEWRP-APLPKPRIDGPHMATVVGPKGEEIYCDQWGRVKVSFPWDRESENNEFSSCW 430
             +  +RP     KP I+GP  A VVGP GEEI+ D+ GRVK+ F WDR+ + N+ SSCW
Sbjct: 363 RKKIAYRPQLNTRKPLINGPQTAIVVGPPGEEIFTDELGRVKLQFHWDRQGQFNDQSSCW 422

Query: 431 VRVSQGWAGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLPPYDLPEHKTRM 490
           VRV+Q  A G +GS+ IPR+G +V++ +++ +PD+P+I G  Y     PP+ LP +KT+ 
Sbjct: 423 VRVAQSGASGGFGSIQIPRVGDEVVVVFLDGNPDRPLIMGSLYNSTNTPPWSLPANKTQS 482

Query: 491 TIKSQTHKGEG--FNELRFEDELGRQEVFIHAERDQNNIVKHDETTRVGNDRTERVERDE 548
              +++ KG+G   N  RFED+ G +++ +HAER+ +  ++ DET  VGN+R        
Sbjct: 483 GFLTRSMKGDGGTANFFRFEDKAGAEQIIMHAERNMDTEIELDETHDVGNNR-------- 534

Query: 549 TISIGQDRREDIARDESVGIGQNRVHEIGNDDSLSIGRNHRITTGKDRIEQVGNHRQDIT 608
           +I++G    E + +D  V + +       ++  + +     I      I QVG+    IT
Sbjct: 535 SITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVAAKQHI------ILQVGD--SSIT 586

Query: 609 KANHTVEIGGHREQVVAGHSTLQTGEAIR 637
                +EI G      +  +T  TG A+R
Sbjct: 587 LTPEGIEIKGKVIVTTSTDTTQITGAAVR 615