Pairwise Alignments

Query, 725 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

Subject, 722 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

 Score = 1031 bits (2666), Expect = 0.0
 Identities = 503/709 (70%), Positives = 576/709 (81%), Gaps = 10/709 (1%)

Query: 1   MPSQSDLRFTFQPLVGRSEFEVVSFELDEAISSPFRLQLELVSFEDDVDFAQLLDKPVLF 60
           MPSQSDLR++F+ LVG++ FEVVSFEL E IS+PF L+L+L+SFE+D+DF  LLDKPVLF
Sbjct: 1   MPSQSDLRYSFEALVGKAAFEVVSFELREGISAPFELELKLISFENDIDFGHLLDKPVLF 60

Query: 61  TLWQGERPLRYVHGLVSTFSQGETGFDRTRYRALVEPVLARAGLRSNWRIFQQKTVPQIL 120
           T+  GERP+RYVHGLVS+FSQGE+GF RT Y ALVEP LARA LRSNWRIFQ KTVPQIL
Sbjct: 61  TILDGERPVRYVHGLVSSFSQGESGFYRTYYHALVEPQLARARLRSNWRIFQHKTVPQIL 120

Query: 121 EIMLKRQGVNAYELKCLDPHQVREFCVQAGETDLDFMARLAAEEGIVYRFDHTPKQHLLI 180
           E+MLKRQG++ YEL+    HQVREFCVQAGETDL F+ARLAAEEG VYRF H+ K H LI
Sbjct: 121 ELMLKRQGIDQYELRASMDHQVREFCVQAGETDLAFIARLAAEEGFVYRFAHSEKLHKLI 180

Query: 181 ITDRLLALGQISRGAIKTDDEDEGFHNDD--VGPDQVLYRSVGGGDQARPCLRRLRYSEQ 238
           ITDRL +LG IS GAIK D EDEGF +DD  VGPD VLY++  GGDQA PCLRRLRYSEQ
Sbjct: 181 ITDRLQSLGLISHGAIKADHEDEGFGDDDEPVGPDSVLYQANSGGDQAIPCLRRLRYSEQ 240

Query: 239 VRTARQVQRDYTFTHPQYRQEHQAYDNSNTHQSLNYERFDYPGRYKRDAVGVPFTATRLT 298
           VRTARQVQRD+TFTHP YRQEH+A      HQS +YE FDYPGRYKRDAVG PFT  R+T
Sbjct: 241 VRTARQVQRDHTFTHPAYRQEHRAAGPFLEHQSKDYEYFDYPGRYKRDAVGKPFTENRIT 300

Query: 299 ALRHDARIAEVEGDDVRLQPGLSFTLIEHPREDLNVHWRTVSVHHEGTQFTSLQEEAADS 358
           ALRHD RIAEV+GDDVRLQPGLSFTL +HPREDLNVHWR  +VHHEG+Q TSLQEEAA +
Sbjct: 301 ALRHDVRIAEVQGDDVRLQPGLSFTLTDHPREDLNVHWRVSTVHHEGSQPTSLQEEAAGA 360

Query: 359 QQGTRYKQEALLVPGRTEWRPAPLPKPRIDGPHMATVVGPKGEEIYCDQWGRVKVSFPWD 418
            QGTRY+Q+A+LVPGRTEWRPAPLPKPR+DGPHMATVVGP GEEIYCD+WGRVKVSFPWD
Sbjct: 361 DQGTRYEQKAVLVPGRTEWRPAPLPKPRVDGPHMATVVGPPGEEIYCDEWGRVKVSFPWD 420

Query: 419 RESENNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGNQL 478
           RES+NNEFSSCW+RVSQGWAGGSWGSMAIPRIGQDVII YVN DPDQPMITGRTYCGNQL
Sbjct: 421 RESQNNEFSSCWLRVSQGWAGGSWGSMAIPRIGQDVIIHYVNGDPDQPMITGRTYCGNQL 480

Query: 479 PPYDLPEHKTRMTIKSQTHKGEGFNELRFEDELGRQEVFIHAERDQNNIVKHDETTRVGN 538
           PPYDLP HKTRMTIKSQTHKG+GFNELRFEDELG++EVFIHA+RDQNN+VKHDETT+VGN
Sbjct: 481 PPYDLPRHKTRMTIKSQTHKGDGFNELRFEDELGQEEVFIHAQRDQNNVVKHDETTQVGN 540

Query: 539 DRTERVERDETISIGQDRREDIARDESVGIGQNRVHEIGNDDSLSIGRNHRITTGKDRIE 598
           DR E+V+ DE+I IG DR E +  DE + IGQ        D +L IGRNH I   KDR+E
Sbjct: 541 DRKEQVDNDESILIGHDRTETVGNDERITIGQ--------DAALDIGRNHTIRIAKDRVE 592

Query: 599 QVGNHRQDITKANHTVEIGGHREQVVAGHSTLQTGEAIRHTTKVYDIQVSESLTIRSPAG 658
            +GNHR D   ANH   IGG+ EQ V GH+ L+    IR  T+ Y+++ SE++ I+ P G
Sbjct: 593 NIGNHRHDQIAANHHTRIGGNFEQRVEGHAELEARGDIRRRTRRYELRASEAVVIQGPGG 652

Query: 659 LLRVDGAGITLDGLALAFKGPVSQQATGSNRVTSTSGVPAPGEPICLSC 707
            +R+D  GITLD   +   G + + A G+    S S  P  G+P+   C
Sbjct: 653 SIRIDETGITLDSPTIRITGQMLKSANGTTSPFSISSAPNTGKPLERLC 701