Pairwise Alignments

Query, 417 a.a., gluconate 2-dehydrogenase cytochrome c subunit from Pseudomonas putida KT2440

Subject, 306 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  158 bits (399), Expect = 2e-43
 Identities = 99/266 (37%), Positives = 141/266 (53%), Gaps = 18/266 (6%)

Query: 32  GEYLARAGDCVACHTAKGGK-----PFAGGLPMETPIGTVYSTNITPAAS-GIGQYSFED 85
           GE L  AG C +CH A   K       +GG  +++P GT +  NI+     GIG ++  +
Sbjct: 48  GETLFWAGGCASCHAAPDAKGEGLLTLSGGQALKSPFGTFHVPNISSDPQHGIGGWTLAE 107

Query: 86  FDQAVRRGIGKDGSTLYPAMPYPSYARVSEQDMQALYAYFMKGVAPVEQANKASD--IPW 143
           F  A+ RG+ K+G  LYP+ PY SYAR++++D+  L+ Y    V P  Q N A D  +P+
Sbjct: 108 FGDAMTRGVAKNGEHLYPSFPYASYARMTQKDINDLFGYLK--VLPASQ-NDAPDHELPF 164

Query: 144 PLSMRWPLAIWRGV-FAPEAKPWQASATADPVVNRGAYLVEGLGHCGACHTPRALTMQEK 202
           P ++R  L  W+ + F P A P    A A+  + RG YLVEG GHCG CHTPR       
Sbjct: 165 PFNLRMALGGWKFLYFDPAAPPRVELANANAELLRGQYLVEGPGHCGECHTPR------D 218

Query: 203 ALSAADGEQFLAGSAPLEGWIAKNLRGDHKDGLGSWSEAQLVQFLKTGRSDRSAVFGGMS 262
           AL     +++LAG    EG             +GSW+EA +  +L+TG +      GG  
Sbjct: 219 ALGGFLADKWLAGGPNPEGEGRIPDITPGSQSIGSWAEADIASYLETGFTPEFDSVGGSM 278

Query: 263 DVVEHSMQHMSDADLTAIARYLKTLP 288
             V+ +M H++  D  AIA YLK +P
Sbjct: 279 VKVQQNMAHLTTEDRDAIAAYLKAIP 304



 Score = 35.0 bits (79), Expect = 3e-06
 Identities = 40/154 (25%), Positives = 61/154 (39%), Gaps = 24/154 (15%)

Query: 153 IWRGVFAPEAK-PWQASATADPVVNRGAYLVEGLGHCGACHTPRALTMQEKALSAADGEQ 211
           I+  V APE + P    +  +P +  G  L    G C +CH   A   + + L    G Q
Sbjct: 22  IFAWVTAPERQAPSHWVSLGEPDLANGETLFWA-GGCASCHA--APDAKGEGLLTLSGGQ 78

Query: 212 FLAGSAPLEGWIAKNLRGDHKDGLGSWSEAQLVQFLKTGRSDRSAVFGGMSDVVEH---- 267
            L   +P   +   N+  D + G+G W+ A+             A+  G++   EH    
Sbjct: 79  AL--KSPFGTFHVPNISSDPQHGIGGWTLAEF----------GDAMTRGVAKNGEHLYPS 126

Query: 268 ----SMQHMSDADLTAIARYLKTLPPSNPDDQLH 297
               S   M+  D+  +  YLK LP S  D   H
Sbjct: 127 FPYASYARMTQKDINDLFGYLKVLPASQNDAPDH 160