Pairwise Alignments

Query, 339 a.a., 2-ketogluconate utilization repressor from Pseudomonas putida KT2440

Subject, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  142 bits (358), Expect = 1e-38
 Identities = 98/335 (29%), Positives = 166/335 (49%), Gaps = 15/335 (4%)

Query: 13  TISEVARVAGVSKATVSRYIGGDRQLLAEATAKRLEEVIERLGYRPNQMARGLKRGQTRL 72
           TI +VA +AG+S  TVS  +   R + +E    ++E  I++L Y P+ +AR LK   T  
Sbjct: 3   TIKDVAALAGISYTTVSHVVNKTRPV-SEPVRIKVEAAIKQLDYVPSAVARSLKAKTTAT 61

Query: 73  IGMLVADILNPYSVAVMHGVETACRQHGYSLVVCNTNRDDEQERHHLVALQSYNVEGLIV 132
           IG+LV + LNPY   +  G+E  C ++GY +++CN++ + E++R++L  L    ++GLIV
Sbjct: 62  IGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLIV 121

Query: 133 NTLGHHPGEL---LNLQRDIPMVLVDRQLPELNVDLVGLDNADAVEQALDHLQAQGYRDI 189
            ++G     L   L+  R  PMV+VDR L  ++VDLV +D+ +    A  HL   G+RDI
Sbjct: 122 TSVGGDDSGLAAGLSAVR-TPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRDI 180

Query: 190 LAVSEPLDGTSSRL------ERVQAFGASISRRPGMRQQVLEIGAGLQGQLASFLAHSGH 243
             +  P     +++        ++  G +++            G    G  A+    + +
Sbjct: 181 ACIGGPAHTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTG----GYTAAVQLLTEN 236

Query: 244 GPQAIFTFNGVATLAVTRALLEAGRNLVADVGLIALDDLDWYPLVGKGITALAQPTERIG 303
            P AIF  N +    V RA  E    +  ++ +I  DD+     V   +T + Q   ++G
Sbjct: 237 PPSAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLG 296

Query: 304 VAAFESLLGRLRGDSGAARRIDFKANLIIRGSTQP 338
             A E LL R+        +     ++++R ST P
Sbjct: 297 ETAAELLLRRIATPHMPIDQRIVTPSIVLRESTAP 331