Pairwise Alignments

Query, 339 a.a., 2-ketogluconate utilization repressor from Pseudomonas putida KT2440

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  138 bits (348), Expect = 2e-37
 Identities = 101/336 (30%), Positives = 162/336 (48%), Gaps = 15/336 (4%)

Query: 13  TISEVARVAGVSKATVSRYIGGDRQLLAEATAKRLEEVIERLGYRPNQMARGLKRGQTRL 72
           TI +VA  A VS  TVS  +   R + A+   +R+E  I  LGY PN MAR LK   T  
Sbjct: 3   TIKDVALQAEVSVTTVSHVVNDTRHVSAKVR-ERVELAIRELGYVPNAMARSLKSNTTST 61

Query: 73  IGMLVADILNPYSVAVMHGVETACRQHGYSLVVCNTNRDDEQERHHLVALQSYNVEGLIV 132
           +GML+ +  NPY   ++  VE  C   GY+LV+CNT+ +  ++  +L  L    ++GLIV
Sbjct: 62  LGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLIV 121

Query: 133 NTLGHHPGELLNLQRD---IPMVLVDRQLPELNVDLVGLDNADAVEQALDHLQAQGYRDI 189
              G    + L  Q     +P VLVDR++ +   DLV   +      A+ HL + G++ I
Sbjct: 122 VLTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKRI 181

Query: 190 LAVSEPLDGTSSRLERVQAFGASISRRPGMRQQVLEIGAGL-------QG--QLASFLAH 240
             +     G     +R++ +  +++   G    +    A L       QG  +    +  
Sbjct: 182 ACIGGQA-GVMPSEQRIEGWRMALA-EAGATPDIANGDALLWRGGFTSQGGYEAMHAILR 239

Query: 241 SGHGPQAIFTFNGVATLAVTRALLEAGRNLVADVGLIALDDLDWYPLVGKGITALAQPTE 300
           +   P A+F  N +  +   RA  E+G  +  D+ ++  DD++        +T +AQP E
Sbjct: 240 TERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKE 299

Query: 301 RIGVAAFESLLGRLRGDSGAARRIDFKANLIIRGST 336
           RIG  A + LL ++ G    AR++  +  L +R ST
Sbjct: 300 RIGAMAVDMLLEQMGGKRRDARKVVLQPELRVRAST 335