Pairwise Alignments

Query, 339 a.a., 2-ketogluconate utilization repressor from Pseudomonas putida KT2440

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  149 bits (376), Expect = 1e-40
 Identities = 102/342 (29%), Positives = 168/342 (49%), Gaps = 27/342 (7%)

Query: 13  TISEVARVAGVSKATVSRYIGGDRQLLAEATAKRLEEVIERLGYRPNQMARGLKRGQTRL 72
           TI +VA +AG+S  TVS  +   R + +E    ++E  I  L Y P+ +AR LK   T  
Sbjct: 3   TIKDVAALAGISYTTVSHVLNKTRPV-SEQVRLKVEAAIIELDYVPSAVARSLKARSTAT 61

Query: 73  IGMLVADILNPYSVAVMHGVETACRQHGYSLVVCNTNRDDEQERHHLVALQSYNVEGLIV 132
           IG+LV + +NPY   +  G+E AC ++GY +++CN++ + +++R +L  L    ++GL+V
Sbjct: 62  IGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLVV 121

Query: 133 NTLGHHPGELLNLQR-DIPMVLVDRQLPELNVDLVGLDNADAVEQALDHLQAQGYRDILA 191
            ++G     L +L     PMV+VDR+L  ++ DLV +D+      A  HL   G+RD+  
Sbjct: 122 ASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVAY 181

Query: 192 VSEPLDGTSSRLERVQAFGASISRRPGMRQQVLEIGAGLQGQL---ASFLAHSGHG---- 244
           +  P +            G +  R  G R+ + E GA + G       F +  GH     
Sbjct: 182 IGGPAE-----------TGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQ 230

Query: 245 ------PQAIFTFNGVATLAVTRALLEAGRNLVADVGLIALDDLDWYPLVGKGITALAQP 298
                 P AIF  N +    V RA  E   ++  ++ +I  DD++    V   +T + Q 
Sbjct: 231 VLEGKRPSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQS 290

Query: 299 TERIGVAAFESLLGRLRGD-SGAARRIDFKANLIIRGSTQPQ 339
              +G +A   LL R+     GAA +      +++R ST P+
Sbjct: 291 IRELGESAASLLLTRIATPRQGAAEQRIVAPRIVLRESTGPR 332