Pairwise Alignments

Query, 787 a.a., outer membrane protein assembly factor from Pseudomonas putida KT2440

Subject, 810 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score =  562 bits (1448), Expect = e-164
 Identities = 314/810 (38%), Positives = 466/810 (57%), Gaps = 34/810 (4%)

Query: 6   LLLSILLLKATLAQASPFRIADIRVNGLQRVSAGSVFGALPLNVGDQADDRRLVDSTRSL 65
           L+ S+L   AT+  A  F + DI   GLQRV+ G+   ++P+  GD  +D  + ++ R+L
Sbjct: 7   LIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALLSMPVRTGDTVNDEDISNTIRAL 66

Query: 66  FKTGFFQDIQLSRDGNVLIINVVERPSVSSIEIEGNKAISTEDLMKGLKQSGLAEGEIFQ 125
           F TG F+D+++ RDG+ L++ V ERP+++SI   GNK++  + L + L+ SG+  GE   
Sbjct: 67  FATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLD 126

Query: 126 RATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRNRVALKIKINEGTVAAIQHINIVGNN 185
           R T+  +   L+  Y + G+YSA V A V P PRNRV LK+   EG  A IQ INIVGN+
Sbjct: 127 RTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIVGNH 186

Query: 186 VFDDETLGQLFELKT-TNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIASTQV 244
            F  + L   F+L+    W +    D KY ++KL+GDLE LRSYYLDRGY   +I STQV
Sbjct: 187 AFTTDELISHFQLRDEVPWWNVV-GDRKYQKQKLAGDLETLRSYYLDRGYARFNIDSTQV 245

Query: 245 SITPDKKHVYITVNINEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVMTTTS 304
           S+TPDKK +Y+TVNI EG++Y +  V++SG+L     +++ L  ++PG++++   +T   
Sbjct: 246 SLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKME 305

Query: 305 ELITRRLGNEGYTFANVNGVPQPNDQDHTVDIMFVVDPGKRAYVNRINYRGNTKTEDEVL 364
           + I + LG  GY +  V  +P+ ND D TV +   VD G R YV +I + GN  ++D VL
Sbjct: 306 DDIKKLLGRYGYAYPRVQSMPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVL 365

Query: 365 RREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPQVPGTDDQVDVNYSVEEQASGS 424
           RREMRQMEG W  + L+DQ K RL RLGFF+ V+ +T +VPG+ DQVDV Y V+E+ +GS
Sbjct: 366 RREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKERNTGS 425

Query: 425 ITASVGFAQSAGLILGGSISQSNFLGTGNKVSIGLTRSEYQTKYNFGFVDPYFTADGVSL 484
               +G+   +G+     + Q N+LGTG  V I  T+++YQT       +PYFT DGVSL
Sbjct: 426 FNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSL 485

Query: 485 GYNLFYNSTDYSDYYDDGVSYYAINSYGAGVSFGYPINETSRLTYGLTLQHDDIS----- 539
           G  LFYN        D  +S Y   SYG  V+ G+PINE + L  GL   H+ +S     
Sbjct: 486 GGRLFYNDFQAD---DADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQ 542

Query: 540 ----PGTYSADEIYDFISREGKSF--NNLKASIGWSESTLNKGVLATRGHSQSLTLMATT 593
                  YS  E +   S +  SF  ++   + GW+ + L++G   T G   +LT   T 
Sbjct: 543 VAMWRYLYSMGE-HPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTI 601

Query: 594 PGSDLSFYKLDYNGQAFLPVTSN--TTLRLHTNLGYGNGYGSTDGLPFYESYNAGGQGSV 651
           PGSD  +YK+  +   ++P+  +    +   T  GYG+G G  + +PFYE++ AGG  +V
Sbjct: 602 PGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKE-MPFYENFYAGGSSTV 660

Query: 652 RGFKDGTLGPRSTPATGAYSNAGQAYYSD-----------RDTDVLGGNILITGGAEYLF 700
           RGF+  T+GP++       SN    Y  +           +  D +GGN +     E++ 
Sbjct: 661 RGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFIT 720

Query: 701 PLPFVKDQ--SQLRSSVFVDAGNVYADTCYLSTTQGCGSV-DLAQMAVSLGVGVTWYSPM 757
           P PF+ D+  + +R+S F D G V+      S   G     D + + +S G+ + W SP+
Sbjct: 721 PTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPL 780

Query: 758 GPLSFSLAAPLKKPDNAETQVFQFSLGQTF 787
           GPL FS A P KK D  + + FQF++G+T+
Sbjct: 781 GPLVFSYAQPFKKYDGDKAEQFQFNIGKTW 810