Pairwise Alignments

Query, 419 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 472 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  214 bits (545), Expect = 4e-60
 Identities = 136/354 (38%), Positives = 207/354 (58%), Gaps = 20/354 (5%)

Query: 68  QPQDVQVGLYDDQDRLLAGQTVHVARFEQALLDRDGRPLVLRASVATRVGMAPRPRNLGP 127
           QP    + + D  D      + + AR+ Q L+  +G      A +   + + P      P
Sbjct: 131 QPDAASLQVVDGPDGQRYRVSFNTARWRQDLMPENGP-----APIPFFLHLPP------P 179

Query: 128 FV-TGAVMSALFALLCSFYLTRPLTWLREAMGQVAQGRFDVRVRPRLGKRRDEIVDLAED 186
            +  GA+   LF+ + ++ L RPL+ LR +  +VAQG   VR+ P + +R DEI D+A D
Sbjct: 180 MIWLGALGGLLFSGMLAWNLARPLSQLRASFERVAQGDLSVRLYPSMRRRHDEIGDVARD 239

Query: 187 CDRMAGQLKALVQAQQNLLHDISHELRSPLTRMHAAIGLMRQQPDR-PDMLERVERESRR 245
            D M G+L  LV A++ LLHD+SHELRSPL R+  AIGL RQ PD   + L+R+ERE+ R
Sbjct: 240 FDAMVGRLSVLVSAREQLLHDVSHELRSPLARLQLAIGLARQNPDNVENALQRIEREAER 299

Query: 246 MDDLIEQLLTLARAQSRQGNSDFASVDVVELLAQIVEDARFEAGMKQCQVSLLAQ--GAF 303
           MD +I ++LTL+RA++   N++    D++ L+  +V DAR+EA +    ++L       +
Sbjct: 300 MDKMIGEVLTLSRAENDAVNNE-EYFDLLGLVNAVVNDARYEAQVPGVDIALNISDYDDY 358

Query: 304 LMHGHEELLYRAFENVIRNAVRYTKPGTAVLVEAAPAPGGQWLQVCVSDHGPGVDPARLQ 363
            + G  EL+  A +N+IRNA+R++  G  VLV  +      W  + V+D GPGV+ ++L 
Sbjct: 359 TVKGSAELMRHALDNIIRNALRFSSRGQQVLVTLS-RDEKNWC-IGVADRGPGVEESKLS 416

Query: 364 RIFEPFDR--GTDSSDGFGLGLAIAQRAIALHGGSITALAAATGGLRVRIELPQ 415
            IF+PF R     S  G+GLGLAIA++A+  HGG I A     GGL++RI +P+
Sbjct: 417 SIFDPFMRIDSPQSGKGYGLGLAIARKAVVAHGGRIEAENRDQGGLQIRICIPR 470