Pairwise Alignments

Query, 283 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 301 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  135 bits (339), Expect = 1e-36
 Identities = 90/285 (31%), Positives = 139/285 (48%), Gaps = 10/285 (3%)

Query: 3   DWEDLRHFSAFSSAGSLSAAAKTLGVDHATVARRIASLEASLQLKLVDRRPRAYALTHEG 62
           +W+ LR   A +  G+LSAAAK LGV H+TV+R +A LEA ++ +LV R P    LT  G
Sbjct: 2   NWDYLRALIAVARGGTLSAAAKMLGVKHSTVSRHLAGLEAEIRTRLVVRAPGGLTLTDAG 61

Query: 63  QRVAELAEQMAMSSFALEHFASAGQQTVEGEVVLSAPPALLGSIIARRLGELYQRYPQLR 122
            R+ E AE M + +   +   S    ++ G V + AP A     ++ RL  L  + P L+
Sbjct: 62  LRLLEAAEAMELQAQTAQDEISGRDVSISGTVRIGAPDAFGAYFLSPRLTRLLDQNPALK 121

Query: 123 LKLVGSKSKASLVRREADISIALARPTEPTLVVSLLGHLDYRLYASPGYLASATV----- 177
           ++LV +    +L +READI+IAL  P    LV   +      ++AS  YLA         
Sbjct: 122 VQLVATPRSFNLTKREADIAIALTMPERGRLVTRKMATYGLGVFASAAYLADKPAIRSVD 181

Query: 178 ----RRYIGYDESQARSPQQQWLNLQAGQQPFALHSNDLRIQAQACAGGIGIACLPAFMA 233
                R+I Y +    + +  +L   A     A  S++L  Q  A   G+G+  LP F+A
Sbjct: 182 DLRRHRFISYIDDLIFTRELDYLGEVATGIDAAFQSSNLFAQMHAARAGLGVCILPYFLA 241

Query: 234 QE-HGLKEAGSAQQTMSIEIWLAVHEDVRATPRIKAVTDFLQQQV 277
                LK        +    W+ VHE+ +   R++   DF+ Q++
Sbjct: 242 SGCPDLKLVLPDAVRLVRSWWIIVHEEQKNIARVRITADFITQEL 286