Pairwise Alignments

Query, 283 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  135 bits (339), Expect = 1e-36
 Identities = 86/288 (29%), Positives = 142/288 (49%), Gaps = 8/288 (2%)

Query: 1   MFDWEDLRHFSAFSSAGSLSAAAKTLGVDHATVARRIASLEASLQLKLVDRRPRAYALTH 60
           M  W+D R   A +  GSL+ AA+ L V+H+TV RR+ +LE  L  +L +R    Y  T 
Sbjct: 1   MIPWDDFRLVRAIAETGSLAGAAEQLAVNHSTVFRRLGTLEQQLGARLFERARAGYVPTP 60

Query: 61  EGQRVAELAEQMAMSSFALEHFASAGQQTVEGEVVLSAPPALLGSIIARRLGELYQRYPQ 120
            G+ +  LAE MA    A+E   +       GE+ ++    LL  ++        + YP+
Sbjct: 61  MGEEMVRLAEHMADEVLAVERRITGQDLRPSGELRVTTNDTLLVHMLTPIFASFREAYPE 120

Query: 121 LRLKLVGSKSKASLVRREADISIALARPTEPTLVVSLLGHLDYRLYAS-----PGYLASA 175
           +RL +V S    SL +R+AD++I  +     TLV   +  + + +Y S      G L  A
Sbjct: 121 IRLDVVISNQSLSLSKRDADVAIRASDRPGDTLVGRRMASIAWGIYGSATQDISGPLDPA 180

Query: 176 TVRR--YIGYDESQARSPQQQWLNLQAGQQPFALHSNDLRIQAQACAGGIGIACLPAFMA 233
            +RR  +IG+ ++       +WL  + G++      N +   A+A A GIG+A LP F+A
Sbjct: 181 DLRRHDWIGFSDNLGAIKPAKWLRERVGEEKIIYRVNTVLGLAEAAAAGIGLALLPCFIA 240

Query: 234 Q-EHGLKEAGSAQQTMSIEIWLAVHEDVRATPRIKAVTDFLQQQVRPL 280
               GL +    Q  +   +WL  H D++AT R++   +   +++  L
Sbjct: 241 AVTPGLVQLMGRQSELESGLWLLTHPDIKATARVRTFMEHAGREIGKL 288