Pairwise Alignments

Query, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  120 bits (300), Expect = 5e-32
 Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 4/290 (1%)

Query: 1   MNLKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRKVILTAE 60
           MNL+ LR  VE+VRQG F++AA+ + + Q ++S AV  LE+ELG  L NR   +  LTA 
Sbjct: 1   MNLRTLRAFVEVVRQGGFSQAAEVVSLTQSSVSKAVKTLEDELGTPLLNRLGHRNELTAA 60

Query: 61  GEQFLPRIASALREMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKSYPGI 120
           GE    R    L E +    E+ D+  LKRG +R+G+PP+        +   +R  YP I
Sbjct: 61  GEIAYRRALVLLAERNDLVAEINDLRGLKRGVLRIGLPPVGCGVLFATMFATYRSRYPDI 120

Query: 121 AMTVFEGSAEDIGHRLEQREIDLALLESRRVPPDKESILLGSDEMLACMHPDHPYAGKAY 180
            + + E  ++ +   LE  E+DLA L    V  D +   + ++ ++A +   HP A    
Sbjct: 121 DIELTEYGSKKLRECLEAGEVDLAAL-LLPVDEDFDYQPVRNEPLMAVLPMSHPLAHLKR 179

Query: 181 LTAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQSNFVSLVVQAALDNMGVATL 240
           +    L ++  ++F+  F     + A     G+T +V  +S  +  ++      +GVA +
Sbjct: 180 IDFTHLADSPFILFEAGFALNAKILAACERKGVTPKVTARSGQIDFIIDLVAAGLGVAFV 239

Query: 241 LR--SVQQRTPGIVGVPF-RPAQQMSFRLCWRSGEYLSLASKRFIDFAAQ 287
            R  + + +  GI  +P   P       L WR+  +L  A+  +++ A +
Sbjct: 240 PRMLAYKHQHAGIALIPLDEPHTDWHIALAWRTSAHLPPAALAWLELARE 289