Pairwise Alignments

Query, 847 a.a., Response regulator from Pseudomonas putida KT2440

Subject, 364 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  110 bits (275), Expect = 1e-28
 Identities = 87/262 (33%), Positives = 134/262 (51%), Gaps = 16/262 (6%)

Query: 442 GDPNKTYDSGALGDRLTPRKSFAIWKETVHQQSLPWTEQDRQFGDAIRTAIVEVVLHNSE 501
           G+PN  + +GAL   L   +  AI    V         Q +Q  D ++  +   V+   E
Sbjct: 103 GEPNLRFYAGAL---LKTTEGHAIGTLCVLDYQPRQLSQLQQ--DTLKV-LARQVMRQLE 156

Query: 502 LLAS--ERAKADVRQRMLNEELNHRVKNILSLIGALVAHPTPESQTLQDYVATLKGRIQA 559
           L  +  ER +A  +Q +LN E+ HR+KN L+++ A +A  T +S   +D V  L  RI A
Sbjct: 157 LRQALRERDEAQKQQAILNAEITHRMKNTLAMVQA-IATQTLKSVQERDAVDALCRRIAA 215

Query: 560 LSLAHDQVVRGDGGGRLAKLLEAELSPYRTAADVIELQGPNVILDARAYSVMALVLHELA 619
           + +AHDQ+++ D        +   +         I   GP++ L  +    ++L+LHELA
Sbjct: 216 MGIAHDQLLQQDWMAASMMSVVRPMLELHGDDGRIATSGPDIELGPKTTLSLSLLLHELA 275

Query: 620 TNAAKYGALSRAGGKLSVSWAID---ASNACAISWREMGGPTVRPPSRSGFGTVLIDRSI 676
           TNAAK+GALS  GGK+ +SW ID         ++W+E+ GP V  P R  FG++LI+  +
Sbjct: 276 TNAAKHGALSVPGGKVDLSWTIDEEAGEPTLRMTWQELCGPVVSEPGRRSFGSLLIEMGL 335

Query: 677 PFDLGGTSAVE-YHPEGLQGFF 697
              LG    V+ + P GL   F
Sbjct: 336 ---LGKGGVVKAWMPSGLVARF 354



 Score = 25.8 bits (55), Expect = 0.005
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 59  QKLHAVLGDEVTHTLRNALA 78
           QK  A+L  E+TH ++N LA
Sbjct: 168 QKQQAILNAEITHRMKNTLA 187