Pairwise Alignments

Query, 847 a.a., Response regulator from Pseudomonas putida KT2440

Subject, 854 a.a., Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) from Sphingobium sp. HT1-2

 Score =  600 bits (1548), Expect = e-176
 Identities = 331/845 (39%), Positives = 499/845 (59%), Gaps = 8/845 (0%)

Query: 7   VNLTNCDREPIQIPGSIQPHGCLLACDASATVVLRHSVNAPQMLGVAND-INGQKLHAVL 65
           V++ NCDREPI + G++QP G L+A  A   +V R S N+   +G+A + + GQ + A+ 
Sbjct: 14  VDINNCDREPIHVLGTVQPFGFLVALTAD-WLVSRVSTNSADHIGLAPEQMLGQPISALF 72

Query: 66  GDEVTHTLRNALARTRDASRPALSFGVTLPNGAA-VDIAAHLYKGTAILEFEPAGASIAE 124
             +  HTLRN +   R        F + L  G A  D+A H      ++E EPA     E
Sbjct: 73  TADAIHTLRNRITLLRGPDSVERVFSLPLVEGGAPFDVAVHFSGQLVVIEAEPAVPDEME 132

Query: 125 PIELARTLIAQLREIDQTHKLFRDAARFVRAVLGYDRVMIYQLGADGAGKVVAESKRSDL 184
              + R+++A+L + D      RD AR VRA+ G+DRVM+Y+   +G G+VVAE+ R  +
Sbjct: 133 ASSMVRSMVARLAQADGMTAFLRDGARQVRALTGFDRVMVYRFADNGDGEVVAEALRPGI 192

Query: 185 ESFMGQYFPASDIPQQARALYLRNPIRVISDAQFNTVAINPVLDPSGEPLDLSYAHLRSV 244
           +SF G ++PASDIP QARALY+RN  RVI+D     V + P LDP+G  LD+S    R+V
Sbjct: 193 DSFFGLHYPASDIPAQARALYMRNIFRVIADINAPPVPVIPTLDPAGAALDMSLCVTRAV 252

Query: 245 SPIHCEYLCNMGVGASMSISVIVNGELWGMIACHHYAPRTLAMGQRVAAEMFGEFFSLHI 304
           SPIH EYL NMGVGAS+SIS+IV+G+LWG+ ACHHYAPR  +  QR AAE+FG+ FS+ +
Sbjct: 253 SPIHIEYLRNMGVGASLSISIIVDGKLWGLFACHHYAPRLPSFAQRSAAELFGQIFSMML 312

Query: 305 ETLRSRQKLEAAVRIHKALDSLLRDANQAADIDGFFHARLPRLMSLIPCDGIGMSLLGRW 364
           E     +      +  +  D LL    Q  D+          +   IP DG+G+ + G+ 
Sbjct: 313 EGRERAETASYEGKARQVADRLLSAVAQDHDLMSNARWLGDIIFDTIPADGVGIYIDGQM 372

Query: 365 SCAGLAPPQTAVPDLLRLADMVSEGRIWASNRLSTVLPSAQAYFNDVSGVLIIPMSQHPR 424
           + +GL P + +   ++ + +  +  +++ ++ ++ ++P A A+ +  +G+L IP+S+ PR
Sbjct: 373 TLSGLTPDEPSFAAIVSMLNRTAASQVYTTDSIARIMPEALAHADRAAGLLAIPISRRPR 432

Query: 425 DYLIFFRKEVVETLDWAGDPNKTYDSGALGDRLTPRKSFAIWKETVHQQSLPWTEQDRQF 484
           DY++ FR E + ++ WAG  +K  + G  G RLTPRKSF  W E V   ++ +   + + 
Sbjct: 433 DYVVLFRAEQLRSVRWAGKQDKHIEYGPNGPRLTPRKSFEEWSELVKGTAVAFMPAELRV 492

Query: 485 GDAIRTAIVEVVLHNSELLASERAKADVRQRMLNEELNHRVKNILSLIGALVAHPTPESQ 544
            +A+RTA++EV+L  S+    ER +A  +Q +L  ELNHRV+NIL+LI  L++     + 
Sbjct: 493 AEALRTALLEVILRLSDSADEERQRAHEKQELLIAELNHRVRNILALIRGLISQTRDSAM 552

Query: 545 TLQDYVATLKGRIQALSLAHDQVVRGD-GGGRLAKLLEAELSPY-RTAADVIELQGPNVI 602
           ++  ++ TL+ R+ AL+ AHDQ+        RL  L+E E   Y     D ++L GPNV+
Sbjct: 553 SVDQFIGTLESRVHALARAHDQITADRWAPARLYDLIEVEAGAYLGDRRDRVKLTGPNVL 612

Query: 603 LDARAYSVMALVLHELATNAAKYGALSRAGGKLSVSWAIDASNACAISWREMGGPTVRPP 662
           L   A++V+ALV+HEL TNAAKYGALS   G +++ W +DA  +  + W E GGP V  P
Sbjct: 613 LTPAAFTVLALVIHELLTNAAKYGALS-DNGSVAIDWHVDAEGSLLLHWLESGGPAVVAP 671

Query: 663 SRSGFGTVLIDRSIPFDLGGTSAVEYHPEGLQGFFRIPAKHLSVAEAAETALPATPLARA 722
           SR GFG+ +I+RSIP+DL G + V Y   GL+  F IP+ H++              A A
Sbjct: 672 SRRGFGSTVIERSIPYDLDGRAEVNYRLAGLEARFCIPSAHVASILPDVAGTDRAKPAPA 731

Query: 723 NGAFAARSGLCVLILEDQLVIAVGLEQILNDAQIKDVITASSEDQAMQLLGSHKPDAAIL 782
                 + G  +L++ED ++IA+  E  L D   + V+TA+S  +A + +  H  D A+L
Sbjct: 732 PSPHLLK-GRQILLVEDNMIIAMDGEDALRDLGAQ-VVTAASIGRAHEAITLHPVDLAVL 789

Query: 783 DVNLGTGTSISVADELVRRQVPFLFATGYGDGISIPEHLQHVPVARKPYDANAILASLQS 842
           D NLG  TS+ +AD L  R VPFLFATGYGDG+ +P+    V + +KPY    +  ++  
Sbjct: 790 DFNLGNETSLPIADMLAERGVPFLFATGYGDGLDLPDRFSDVILLKKPYSGATLAQAIAP 849

Query: 843 LLELG 847
           +L  G
Sbjct: 850 MLARG 854