Pairwise Alignments

Query, 847 a.a., Response regulator from Pseudomonas putida KT2440

Subject, 863 a.a., Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) from Sphingobium sp. HT1-2

 Score =  588 bits (1517), Expect = e-172
 Identities = 335/860 (38%), Positives = 503/860 (58%), Gaps = 39/860 (4%)

Query: 6   QVNLTNCDREPIQIPGSIQPHGCLLACDASATVVLRHSVNAPQMLGVAND-INGQKLHAV 64
           + +LTNCDREPI + G+IQ  G L+A      ++ R S N   +LG   + + G  L   
Sbjct: 19  KTDLTNCDREPIHLLGAIQQPGFLIAVSTD-WIIARVSANIRDLLGSDPEALIGAPLPDY 77

Query: 65  LGDEVTHTLRNALARTRDASRPALSFGVTL-PNGAAVDIAAHLYKGTAILEFEPAGASIA 123
           +     H LRN ++   +       F   +  +G   D+A H   G  ++E EP  A+  
Sbjct: 78  VPATFLHDLRNRISLLAEPDMVERLFACQIGTSGQPYDVAVHFSNGQIVIEAEPGSAAGG 137

Query: 124 EPIELARTLIAQLREIDQTHKLFRDAARFVRAVLGYDRVMIYQLGADGAGKVVAESKRSD 183
           +     R ++++L         FR+ AR VRA+LGYDRVM+Y+  A GAG VVAE+ ++ 
Sbjct: 138 DATNAVRGMMSRLDRTKDMTAFFREGARQVRALLGYDRVMVYKFAASGAGAVVAEASKTG 197

Query: 184 LESFMGQYFPASDIPQQARALYLRNPIRVISDAQFNTVAINPVLDPSGEPLDLSYAHLRS 243
           + SF+G  +PASDIP+QAR LY RN +RVI D     V + P +D SG+ LDLS + LRS
Sbjct: 198 IGSFLGLNYPASDIPRQARELYKRNLVRVIRDVDAQPVPVVPEIDRSGKRLDLSLSILRS 257

Query: 244 VSPIHCEYLCNMGVGASMSISVIVNGELWGMIACHHYAPRTLAMGQRVAAEMFGEFFSLH 303
           VSPIH EYL NMGV AS+SIS++V+ +LWG+ ACHHY+PR+    +R   E+F E F++ 
Sbjct: 258 VSPIHIEYLKNMGVAASLSISIVVDDKLWGLFACHHYSPRSPTFERRSVCELFAEMFAMR 317

Query: 304 IETLRSRQKLEAAVRIHKALD----------SLLRDANQAADIDGFFHARLPRLMSLIPC 353
           +E+   RQ  E   R     D          +LL+D +   DI          L S IP 
Sbjct: 318 LESRERRQVAEYEERARNISDQLLGAVASDETLLQDPDWLGDI----------LTSAIPA 367

Query: 354 DGIGMSLLGRWSCAGLAPPQTAVPDLLRLADMVSEGRIWASNRLSTVLPSAQAYFNDVSG 413
           DG+G+ + G ++ +G+ PP      ++R  + ++ GR++ ++ + +++  A  Y    +G
Sbjct: 368 DGVGVWINGNYAFSGVTPPTEEFRRIVRALNGLAAGRVFTTDTIGSLVDGADEYAEQAAG 427

Query: 414 VLIIPMSQHPRDYLIFFRKEVVETLDWAGDPNKTYDSGALGDRLTPRKSFAIWKETVHQQ 473
           +L IP+S+ PRDY++ FRKE+ +++ WAGDP+K  + G  G RLTPR+SFA WKETV   
Sbjct: 428 LLAIPISRSPRDYVMLFRKELKQSVRWAGDPHKPIEYGPNGPRLTPRESFAEWKETVEGH 487

Query: 474 SLPWTEQDRQFGDAIRTAIVEVVLHNSELLASERAKADVRQRMLNEELNHRVKNILSLIG 533
           + P+TE + +  + +R  ++EVVL  ++  A+ER ++  RQ ML  ELNHRV+NIL +I 
Sbjct: 488 AEPFTESELRVAETLRATLIEVVLRLADEAAAERRQSTARQEMLIAELNHRVRNILGVIR 547

Query: 534 ALVAHPTPESQTLQDYVATLKGRIQALSLAHDQVVRGD-GGGRLAKLLEAELSPYRTAAD 592
            L+    P+S  ++++V  + GRI AL+ AH+Q+     G   L  L++AE + +  AAD
Sbjct: 548 GLIRQSQPDSPEVKEFVRLVDGRIHALARAHNQITDDHWGPAPLGALIDAEAAAF--AAD 605

Query: 593 ---VIELQGPNVILDARAYSVMALVLHELATNAAKYGALSRAGGKLSVSWAIDASNACAI 649
               I   G   +++ +AYS MALV+HEL TN+ KYG+LS   G++ + W+ D       
Sbjct: 606 RQSAIIANGTPTLINPQAYSTMALVVHELVTNSTKYGSLS-GTGEVHIDWSRDHKGDLRF 664

Query: 650 SWREMGGPTVRPPSRSGFGTVLIDRSIPFDLGGTSAVEYHPEGLQGFFRIPAKHLSVAEA 709
            W+E GGPTV+ P R GFGT +I RS+P+DLGG + +EY PEG++  F IP++H  V++A
Sbjct: 665 VWQESGGPTVQAPKRKGFGTTIIKRSVPYDLGGQANIEYAPEGVRAEFLIPSRH--VSDA 722

Query: 710 AETALPATPLARANGA------FAARSGLCVLILEDQLVIAVGLEQILNDAQIKDVITAS 763
            +   P   + R+N +              VL++ED L+IA+  E ILN      V TAS
Sbjct: 723 RKVDGPTIHIQRSNVSSQHPVDIGVAGQKSVLLVEDSLIIALDAEDILNRLG-ASVSTAS 781

Query: 764 SEDQAMQLLGSHKPDAAILDVNLGTGTSISVADELVRRQVPFLFATGYGDGISIPEHLQH 823
             + A  LL   + D AILD+NLG  TS+ +AD L  + VP+ FA+GYG+  S+P   + 
Sbjct: 782 IAEAAHDLLDEARFDFAILDINLGDQTSLGIADRLQEQGVPYFFASGYGEQASLPMEHRS 841

Query: 824 VPVARKPYDANAILASLQSL 843
             V +KPY  + +  ++Q L
Sbjct: 842 AMVVQKPYTTHNVAKAVQEL 861