Pairwise Alignments

Query, 847 a.a., Response regulator from Pseudomonas putida KT2440

Subject, 884 a.a., Phytochrome-like protein cph1 from Alteromonas macleodii MIT1002

 Score =  191 bits (486), Expect = 1e-52
 Identities = 163/589 (27%), Positives = 272/589 (46%), Gaps = 40/589 (6%)

Query: 1   MTYNPQ-VNLTNCDREPIQIPGSIQPHGCLLACDASATVVLRHSVNAPQMLGVANDINGQ 59
           MT + Q  N   C+ EPI IP S+Q +G L+A +     V   S N   +   A++I G+
Sbjct: 1   MTQSTQNFNFERCEDEPIHIPESVQSYGFLIAFNYEDLEVSIVSENCNTIF--ADEIIGK 58

Query: 60  KLHAVLGDEVTHTLRNALARTRD-ASRPALSFGVTL-------PNGAAVDIAAHLYKGTA 111
               +L  +     R  L  T D  S+  +   + L         GAA+D  A +Y    
Sbjct: 59  GFLDILSSDTDE--RAFLEETFDRVSKSKIRLPIKLHLKASLLKEGAAIDYLAVVYDSGC 116

Query: 112 --ILEFEPAGA-----SIAEPIELARTLIA-QLREIDQTHKLFRDAARFVRAVLGYDRVM 163
             ++E EPA       S  + ++L    IA + +E+    ++ ++    +R +   DRV+
Sbjct: 117 HYVVELEPATEFRDTYSAEQFVKLYSMSIAPRFKEMTSLKEMAQEMVSTIRYLTNMDRVV 176

Query: 164 IYQLGADGAGKVVAESKRSDLESFMGQYFPASDIPQQARALYLRNPIRVISDAQFNTVAI 223
           +Y+   D +GKV+AE+K  D+ES+   YFPASDIP+QAR LY  N +R+  D +     +
Sbjct: 177 LYKFNKDYSGKVIAEAKSEDMESYQDLYFPASDIPKQARELYKTNWVRLTPDTELPASRL 236

Query: 224 NPVLDPS-GEPLDLSYAHLRSVSPIHCEYLCNMGVGASMSISVIVNGELWGMIACHHYAP 282
            P ++ S  E LDL+ + LR+ SPIH +Y+ N G+ AS SIS++ +GEL+G+I+CHH   
Sbjct: 237 IPSVEESERERLDLTRSLLRTFSPIHLQYIRNQGLRASFSISLVTDGELYGLISCHHREA 296

Query: 283 RTLAMGQRVAAEMFGEFFSLHI----ETLRSRQKLEAAVRIHKALDSLLRDANQAADIDG 338
             +    R+  E   + FS H+    E +  R+K        KA+D++L     A  I  
Sbjct: 297 CYIPQNVRLQCENLSQLFSWHLLAKEEEIAKRKKHVT----DKAVDAMLDRIGPANPISR 352

Query: 339 FFHARLPRLMSLIPCDGIGMSLLGRWSCAGLAPPQTAVPDLLRLADMVSEGRI-WASNRL 397
              +     +  +   G            G   P   + D+   A   SEG   + ++ L
Sbjct: 353 VVKSGERAFLDALNSSGFVYYSQYETITLGSTLPVEVIKDIFSKAS--SEGGFPYTNDSL 410

Query: 398 STVLPSAQAYFNDVSGVLIIPMSQHPRDYLIFFRKEVVETLDWAGDPNKTYDSGALGDRL 457
               P A+ +   ++G++IIP+ +  + +  +FRKE      W G  ++  +    G+RL
Sbjct: 411 YHDYPEAREH--GIAGIMIIPLFEKKQYFTAWFRKETHRNQKWIGAKDEKSEDAPKGERL 468

Query: 458 TPRKSFAIWKETVHQQSLPWTEQDRQFGDAIRTAIVEVVLHNSE---LLASERAKADVRQ 514
            PR SF I   T+  +S  + + D    + +    +   L   E   +   E  K D  +
Sbjct: 469 KPRSSFTIHTRTIKGRSTAFDKTDVDTANRLNRMFLVYALDVQERMHISIQELEKQDNYR 528

Query: 515 RMLNEELNHRVKNILSLI--GALVAHPTPESQTLQDYVATLKGRIQALS 561
                 L H ++N L  I  GA +     + +T +   A +  + + +S
Sbjct: 529 NEFLATLAHELRNPLGPIMSGASILETVDDEKTRKRVTAIINRQAEYMS 577