Pairwise Alignments

Query, 847 a.a., Response regulator from Pseudomonas putida KT2440

Subject, 850 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

 Score =  925 bits (2390), Expect = 0.0
 Identities = 461/839 (54%), Positives = 604/839 (71%), Gaps = 3/839 (0%)

Query: 7   VNLTNCDREPIQIPGSIQPHGCLLACDASATVVLRHSVNAPQMLGVANDINGQKLHAVLG 66
           V+LTNCDREPI IPG IQPHGCL+ACD +  +VLRHS N  ++LG+  D+NG+    VLG
Sbjct: 8   VDLTNCDREPIHIPGYIQPHGCLIACDNAMRMVLRHSENCGELLGLEGDLNGRTAEDVLG 67

Query: 67  DEVTHTLRNALARTRDASRPALSFGVTLPNGAAVDIAAHLYKGTAILEFEPAGASIAEPI 126
            ++ H LRNAL  T   +RPA+   +   +G + DI+ H YK T I+EFEP+G+  A+P+
Sbjct: 68  KKLVHDLRNALTVTGRTTRPAMLPAMETSDGRSFDISLHRYKSTTIIEFEPSGSD-AQPL 126

Query: 127 ELARTLIAQLREIDQTHKLFRDAARFVRAVLGYDRVMIYQLGADGAGKVVAESKRSDLES 186
             AR ++ ++RE D    L     R V+A LGYDRVMIY+   DGAGKVV+E+K+ +LES
Sbjct: 127 GTARKMVDRIREADSVESLISRTTRLVKATLGYDRVMIYRFQEDGAGKVVSEAKQPELES 186

Query: 187 FMGQYFPASDIPQQARALYLRNPIRVISDAQFNTVAINPVLDPSGEPLDLSYAHLRSVSP 246
           F+GQYFPASDIPQQARALYL+N +R+ISDA    + + P +D SGEPLDLSYAHLRSVSP
Sbjct: 187 FLGQYFPASDIPQQARALYLKNTLRIISDASGTRIPVLPAVDVSGEPLDLSYAHLRSVSP 246

Query: 247 IHCEYLCNMGVGASMSISVIVNGELWGMIACHHYAPRTLAMGQRVAAEMFGEFFSLHIET 306
           IHCEYL NMGV ASMSISVIV+G LWG+IACHHY+PR L+M  R+AAEMFGEFFS+H++ 
Sbjct: 247 IHCEYLRNMGVAASMSISVIVDGALWGLIACHHYSPRVLSMPVRIAAEMFGEFFSMHLQV 306

Query: 307 LRSRQKLEAAVRIHKALDSLLRDANQAADIDGFFHARLPRLMSLIPCDGIGMSLLGRWSC 366
           L+ +++L+     H ALD  LR A   A+I+            L+PCDG+G+ +   W  
Sbjct: 307 LKQKRRLDTINHAHAALDRFLRLAAHHANIEELLVDSFQDFADLMPCDGVGLWVGNNWHG 366

Query: 367 AGLAPPQTAVPDLLRLADMVSEGRIWASNRLSTVLPSAQAYFNDVSGVLIIPMSQHPRDY 426
            G  PP  A+P L R     SEGR+WA++ LS  +P A+ Y    +G+L IP+SQ   DY
Sbjct: 367 HGATPPHDAIPRLARFVASASEGRVWATHALSQAIPEAEIYAGTAAGMLAIPLSQVKSDY 426

Query: 427 LIFFRKEVVETLDWAGDPNKTYDSGALGDRLTPRKSFAIWKETVHQQSLPWTEQDRQFGD 486
           L+FFRKE+V+ L+WAG+P K+Y++G +GDRLTPRKSFAIWKETV  Q+ PW+E DR+  +
Sbjct: 427 LLFFRKEIVQNLNWAGNPEKSYETGPMGDRLTPRKSFAIWKETVRLQAQPWSEADREIAE 486

Query: 487 AIRTAIVEVVLHNSELLASERAKADVRQRMLNEELNHRVKNILSLIGALVAHPTPESQTL 546
           A R A+VEV  H+SEL+A ER +A+VRQRMLNEELNHRVKN+L++I +LV +P+ E +TL
Sbjct: 487 AARIALVEVAFHHSELMAGERERAEVRQRMLNEELNHRVKNVLAIIKSLVGNPSQEGKTL 546

Query: 547 QDYVATLKGRIQALSLAHDQVVRGDGGGRLAKLLEAELSPYRTAADVIELQGPNVILDAR 606
           Q+YV  LKGRIQALS AHDQ++RG+GGG L  LLEAELSP+R+    ++L+GP + LD+R
Sbjct: 547 QEYVTALKGRIQALSFAHDQIIRGEGGGALRDLLEAELSPHRSPETTVKLEGPQITLDSR 606

Query: 607 AYSVMALVLHELATNAAKYGALSRAGGKLSVSWAIDASNACAISWREMGGPTVRPPSRSG 666
           A+SVMALVLHELATNAAKYGALS+ GG+L V W ++ +  C ISWRE    T+  PSR+G
Sbjct: 607 AFSVMALVLHELATNAAKYGALSQNGGQLHVRWDVNENRDCEISWRETLLTTLPAPSRAG 666

Query: 667 FGTVLIDRSIPFDLGGTSAVEYHPEGLQGFFRIPAKHL-SVAEAAETALPATPLARANGA 725
           FGT LI RSIP+DLGG S + Y P GL+    +P +H+ SV+ A ET   A  L +    
Sbjct: 667 FGTALISRSIPYDLGGRSTIRYLPNGLEAEILLPFRHVSSVSAAFETKTEAETLPQPR-R 725

Query: 726 FAARSGLCVLILEDQLVIAVGLEQILNDAQIKDVITASSEDQAMQLLGSHKPDAAILDVN 785
           +     L VL++EDQ++IA+ +E +L D  IK + TA+S   A++ L ++ PD AILD+N
Sbjct: 726 YNREEPLKVLLVEDQMLIAMDVENMLEDNGIKAIETATSSAMAIEKLKTYLPDVAILDIN 785

Query: 786 LGTGTSISVADELVRRQVPFLFATGYGDGISIPEHLQHVPVARKPYDANAILASLQSLL 844
           LG+ TSI VA EL RR +PFLFATGY DG  +P+    VPV RKPYD +A++A +  L+
Sbjct: 786 LGSDTSIPVARELHRRGIPFLFATGYADGSMVPDEFGAVPVIRKPYDEDALMAGIGVLV 844