Pairwise Alignments

Query, 847 a.a., Response regulator from Pseudomonas putida KT2440

Subject, 736 a.a., bacteriophytochrome protein from Agrobacterium fabrum C58

 Score =  264 bits (674), Expect = 2e-74
 Identities = 171/508 (33%), Positives = 256/508 (50%), Gaps = 30/508 (5%)

Query: 9   LTNCDREPIQIPGSIQPHGCLLACDASATVVLRHSVNAPQMLGVANDINGQKLHAVLGDE 68
           L +C  EPI IPG+IQ HG LL   A    V++ S N    +GV   I        +  E
Sbjct: 8   LDSCGAEPIHIPGAIQEHGALLVLSAREFSVVQASDNLANYIGVDLPIGA------VATE 61

Query: 69  VTHTLRNALARTRDASRPALSFGVTLPNGAAVDIAAHLYKGTAILEFEPAGASIAEPIEL 128
                 + L+           +         +D++AH      ILE E AG       E 
Sbjct: 62  ANLPFISVLSAWYSGEESNFRYAWAEKK---LDVSAHRSGTLVILEVEKAGVG-----ES 113

Query: 129 ARTLIAQLREIDQ--------THKLFRDAARFVRAVLGYDRVMIYQLGADGAGKVVAESK 180
           A  L+ +L  + +           LFR  A+ V ++ G+DR +IY  G D +G VVAE+ 
Sbjct: 114 AEKLMGELTSLAKYLNSAPSLEDALFR-TAQLVSSISGHDRTLIYDFGLDWSGHVVAEAG 172

Query: 181 RSDLESFMGQYFPASDIPQQARALYLRNPIRVISDAQFNTVAINPVLDP-SGEPLDLSYA 239
              L S++G  FPA DIP QAR LY  N +R+I D  +  V I P ++  +G  LD+S++
Sbjct: 173 SGALPSYLGLRFPAGDIPPQARQLYTINRLRMIPDVDYKPVPIRPEVNAETGAVLDMSFS 232

Query: 240 HLRSVSPIHCEYLCNMGVGASMSISVIVNGELWGMIACHHYAPRTLAMGQRVAAEMFGEF 299
            LRSVSP+H EY+ NMG  ASMS+S++VNG LWG+IACHH  P ++++  R A +   + 
Sbjct: 233 QLRSVSPVHLEYMRNMGTAASMSVSIVVNGALWGLIACHHATPHSVSLAVREACDFAAQL 292

Query: 300 FSLHIETLRSRQKLEAAVRIHKALDSLLRDANQAAD-IDGFFHARLPR--LMSLIPCDGI 356
            S+ I   +S Q     V +      LL+    A   +DG       R  L+  +  DG 
Sbjct: 293 LSMRIAMEQSSQDASRRVELGHIQARLLKGMAAAEKWVDGLLGGEGEREDLLKQVGADGA 352

Query: 357 GMSLLGRWSCAGLAPPQTAVPDLLRLADMVSEGRIWASNRLSTVLPSAQAYFNDVSGVLI 416
            + L   +   G  P +  V +L+          ++A++ L+   P+A AY +  SG++ 
Sbjct: 353 ALVLGDDYELVGNTPSREQVEELILWLGEREIADVFATDNLAGNYPTAAAYASVASGIIA 412

Query: 417 IPMSQHPRDYLIFFRKEVVETLDWAGDPNKTYDSGALGDRLTPRKSFAIWKETVHQQSLP 476
           + +S+    +LI+FR EV++T+ W GDP+KT        R+ PRKSF IWKE +   S P
Sbjct: 413 MRVSELHGSWLIWFRPEVIKTVRWGGDPHKTVQESG---RIHPRKSFEIWKEQLRNTSFP 469

Query: 477 WTEQDRQFGDAIRTAIVEVVLHNSELLA 504
           W+E +      +R AI+ +VL  +E +A
Sbjct: 470 WSEPELAAARELRGAIIGIVLRKTEEMA 497