Pairwise Alignments

Query, 627 a.a., p-coumarate CoA-ligase (EC 6.2.1.12) (from data) from Pseudomonas putida KT2440

Subject, 548 a.a., short chain acyl-CoA synthetase, anaerobic (RefSeq) from Escherichia coli BW25113

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 88/315 (27%), Positives = 133/315 (42%), Gaps = 37/315 (11%)

Query: 217 TGPDTIAKFLFTSGSTKLPKAVITTQRMLCANQQMLLQTFPTFAEEPPVLVDWLPWNHTF 276
           T  D +A  LFTSG+  LPK V+ T   + A+++          ++  V +   P  H  
Sbjct: 185 THGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQD--VFMMPAPLGHAT 242

Query: 277 GGSHNLGIVLYNGG-SFYLDAGKPTPQGFAETLRNLREISPTAYLTVPKGWEELVKALEQ 335
           G  H +      G  S  LD   P        L  L +   T  L       +L+  LE+
Sbjct: 243 GFLHGVTAPFLIGARSVLLDIFTPDA-----CLALLEQQRCTCMLGATPFVYDLLNVLEK 297

Query: 336 DPALREVFFARIKLFFFAAAGLSQSVWDRLDRIAEQHCGER-IRMMAGLGMTEASPSCTF 394
            PA          L FF   G +      + +   + C +R I++++  G TE+SP    
Sbjct: 298 QPADLSA------LRFFLCGGTT------IPKKVARECQQRGIKLLSVYGSTESSPHAVV 345

Query: 395 TTG-PLSMAGYV-GLPAPGCEVKLV-------PVGDKLEARFRGPHIMPGYWRSPQQTAE 445
               PLS   +  G  A G E+K+V       P G + E   RGP++  GY+  P+ TA 
Sbjct: 346 NLDDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASRGPNVFMGYFDEPELTAR 405

Query: 446 AFDEEGFYCSGDALKLADARQPELGLMFDGRIAEDFKLSSGVFVSVGPLRNRAVLEGSPY 505
           A DEEG+Y SGD  ++ +A      +   GR  +D  +  G  +S   + +  +L   P 
Sbjct: 406 ALDEEGWYYSGDLCRMDEAGY----IKITGR-KKDIIVRGGENISSREVED--ILLQHPK 458

Query: 506 VQDIVVTAPDRECLG 520
           + D  V A   E LG
Sbjct: 459 IHDACVVAMSDERLG 473