Pairwise Alignments

Query, 627 a.a., p-coumarate CoA-ligase (EC 6.2.1.12) (from data) from Pseudomonas putida KT2440

Subject, 601 a.a., long-chain fatty acid--CoA ligase from Dickeya dianthicola ME23

 Score = 98.6 bits (244), Expect = 7e-25
 Identities = 145/625 (23%), Positives = 250/625 (40%), Gaps = 99/625 (15%)

Query: 52  LLERLVHWAQVRPDTTFIAARQ-ADGAWRSISYVQMLADVRTIAANLLGLGLSAERPLAL 110
           L+ R+      RPD   +A R+ +    + + + Q+   +R IA  LLGLG+  +  +A+
Sbjct: 11  LVHRIQQQIAQRPDA--LAFREWSPEQEQQLDWHQVGERIRRIACGLLGLGIDVQERVAI 68

Query: 111 LSGNDIEHLQIALGAMYAGIAYCPVSPAYALLSQDFAKLRHVCEVLTPGVVFVSDSQPFQ 170
            S N I      L  ++      P+    A     F  + +  ++ T   VFV     F 
Sbjct: 69  FSDNAITWSLADLALLHLRAITVPLYATSAAAQATF--ILNDADIRT---VFVGGQAQFD 123

Query: 171 RAFEAVLDDSV----GVISVRGQVAGRP---HISFDSLLQPGDLAAADAAFAATGPDT-- 221
                 L DS      +I +  Q+  R     +S        +L+  +        D   
Sbjct: 124 LLMS--LRDSCPQLRAIILLDEQIRRRGCDIAVSLQEFEAQAELSVWEPVLRQRVADRDL 181

Query: 222 --IAKFLFTSGSTKLPKAVITTQRMLCANQQMLLQTFPTFAE--EPPVLVDWLPWNHTFG 277
             +   ++TSG+T  PK V+       AN   LL+      +  E  V + +LP +H F 
Sbjct: 182 SDLLTLIYTSGTTGEPKGVMLDY----ANMATLLKLHDERLQTSEQDVSLCFLPLSHVFE 237

Query: 278 GSHNLGIVLYNGGSFYLDAGKPTPQGFAETLRNLREISPTAYLTVPKGWEELVKALEQDP 337
            + +  I+     + YL       +  A        +SPT    VP+ +E++  A+ +  
Sbjct: 238 RAWSFFIMHRGAQNVYLRDTNQVREAMAA-------VSPTVMCAVPRFYEKVFSAIHEKV 290

Query: 338 ALREVFFARIKLFFFAAA-----------GLSQSVWDRLD-RIAEQHCGERIRMMAG--- 382
           A  +  + R  LF +  A           G    VW+ L  R+A++    R+R + G   
Sbjct: 291 A--QAPWHRRTLFHWGIAQGNKRCLRRQDGKRTGVWNALTYRLADRLVLSRLRQLLGGKV 348

Query: 383 ----------------------------LGMTEASPSCTFTTGPLSMAGYVGLPAPGCEV 414
                                        G+TE   + +         G VG P PG +V
Sbjct: 349 RFLPAAGARLDDNIIAFFQAMGVRIVYGYGLTETCATVSCWEDDHYRLGSVGTPLPGIDV 408

Query: 415 KLVPVGDKLEARFRGPHIMPGYWRSPQQTAEAFDEEGFYCSGDALKLADARQPELGLMFD 474
           +   +G++ E + RG  +M GY+R PQ+T  AF  +G++ +GD  ++ DA      L   
Sbjct: 409 R---IGEQNEIQVRGATVMRGYYRRPQETEAAFTPDGWFKTGDVGEM-DANG---NLFIT 461

Query: 475 GRIAEDFKLSSGVFVSVGPLRNRAVLEGSPYVQDIVVTAPDRECLGLLVFP---RLPECR 531
            R+ +  K S G +++  P      L    +++ + V A  R+ +  L+ P    L E  
Sbjct: 462 ERLKDLMKTSGGKYIA--PQHLEGALGQDRFIEQVAVIADARKYVSALIVPCFEALEEYA 519

Query: 532 RLAGLAEDASDARVLANDTVRSWFADWLERLNRDAQGNASRIEWL---SLLAEPPSIDAG 588
           R   L        +L +  + S F    E+  RD Q   +R E +   +LL  P S + G
Sbjct: 520 RSINLGYQ-DRLELLRHSHILSLF----EQRLRDVQKEFARFEQVKKFTLLPAPFSQEEG 574

Query: 589 EITDKGSINQRAVLQRRAAQVEALY 613
           E+T    + ++ + QR   ++EA+Y
Sbjct: 575 ELTPTLKLRRKVIHQRYQLEIEAMY 599